Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:31720775-32180803

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkg1 19 30567551 to 31765033 1197482 - protein coding gene protein kinase, cGMP-dependent, type I
Cpgi10754 19 31762754 to 31763030 276 CpG island CpG island 10754
Cpgi10755 19 31764020 to 31765052 1032 CpG island CpG island 10755
Tssr158824 19 31764963 to 31764990 27 - TSS region transcription start site region 158824
Tssr158825 19 31765000 to 31765015 15 - TSS region transcription start site region 158825
Tssr158826 19 31765027 to 31765079 52 - TSS region transcription start site region 158826
Tssr158827 19 31765238 to 31765283 45 - TSS region transcription start site region 158827
Tssr155937 19 31868754 to 31868787 33 + TSS region transcription start site region 155937
A1cf 19 31868764 to 31948573 79809 + protein coding gene APOBEC1 complementation factor
Tssr155938 19 31868805 to 31868820 15 + TSS region transcription start site region 155938
Tssr155939 19 31873530 to 31873543 13 + TSS region transcription start site region 155939
Tssr155940 19 31881954 to 31881973 19 + TSS region transcription start site region 155940
Tssr5477 19 31910374 to 31910380 6 - TSS region transcription start site region 5477
Tssr158828 19 31910421 to 31910435 14 - TSS region transcription start site region 158828
Tssr158829 19 31910439 to 31910454 15 - TSS region transcription start site region 158829
Tssr158830 19 31910465 to 31910478 13 - TSS region transcription start site region 158830
Tssr155941 19 31910760 to 31910772 12 + TSS region transcription start site region 155941
Gm19241 19 31913644 to 31914551 907 + pseudogene predicted gene, 19241
Tssr158831 19 31914076 to 31914082 6 - TSS region transcription start site region 158831
Tssr155942 19 31914329 to 31914335 6 + TSS region transcription start site region 155942
Tssr5478 19 31932357 to 31932358 1 + TSS region transcription start site region 5478
Moe2 19 31945616 to 31945738 122 QTL modifier of epilepsy 2
D19Mit135 19 31945616 to 31945738 122 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 135
Tssr155943 19 31949779 to 31949794 15 + TSS region transcription start site region 155943
Tssr155944 19 31949953 to 31949965 12 + TSS region transcription start site region 155944
Tssr155945 19 31950012 to 31950024 12 + TSS region transcription start site region 155945
9130016M20Rik 19 31950083 to 31952362 2279 unclassified non-coding RNA gene RIKEN cDNA 9130016M20 gene
Tssr155946 19 31950615 to 31950628 13 + TSS region transcription start site region 155946
Tssr155947 19 31950775 to 31950803 28 + TSS region transcription start site region 155947
Tssr155948 19 31951054 to 31951072 18 + TSS region transcription start site region 155948
Asah2 19 31984654 to 32061469 76815 - protein coding gene N-acylsphingosine amidohydrolase 2
Tssr158832 19 32061330 to 32061346 16 - TSS region transcription start site region 158832
Tssr158833 19 32061353 to 32061362 9 - TSS region transcription start site region 158833
Tssr158834 19 32061366 to 32061381 15 - TSS region transcription start site region 158834
Tssr158835 19 32061384 to 32061413 29 - TSS region transcription start site region 158835
Tssr158836 19 32061438 to 32061465 27 - TSS region transcription start site region 158836
Tssr158837 19 32061480 to 32061493 13 - TSS region transcription start site region 158837
Tssr158838 19 32068735 to 32068757 22 - TSS region transcription start site region 158838
Tssr158839 19 32068770 to 32068779 9 - TSS region transcription start site region 158839
Tssr158840 19 32068803 to 32068812 9 - TSS region transcription start site region 158840
Tssr158841 19 32068823 to 32068836 13 - TSS region transcription start site region 158841
Tssr158842 19 32068859 to 32068862 3 - TSS region transcription start site region 158842
Tssr158843 19 32069674 to 32069681 7 - TSS region transcription start site region 158843
Gm8943 19 32073335 to 32074926 1591 + pseudogene predicted gene 8943
Tssr158844 19 32102850 to 32102861 11 - TSS region transcription start site region 158844
Tssr158845 19 32103072 to 32103092 20 - TSS region transcription start site region 158845
Tssr158846 19 32103106 to 32103154 48 - TSS region transcription start site region 158846
Tssr158847 19 32103160 to 32103169 9 - TSS region transcription start site region 158847
Cpgi10756 19 32107944 to 32108325 381 CpG island CpG island 10756
Tssr158848 19 32108099 to 32108110 11 - TSS region transcription start site region 158848
Tssr158849 19 32108132 to 32108220 88 - TSS region transcription start site region 158849
Sgms1 19 32122727 to 32389712 266985 - protein coding gene sphingomyelin synthase 1
Tssr158850 19 32151287 to 32151292 5 - TSS region transcription start site region 158850
Tssr158851 19 32155351 to 32155365 14 - TSS region transcription start site region 158851
Tssr5479 19 32172544 to 32172546 2 - TSS region transcription start site region 5479
Tssr155949 19 32172700 to 32172747 47 + TSS region transcription start site region 155949