Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:3090578-3320593

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr154168 19 3134204 to 3134205 1 + TSS region transcription start site region 154168
Gm25431 19 3136984 to 3137090 106 - snRNA gene predicted gene, 25431
Gm42068 19 3146684 to 3157399 10715 + pseudogene predicted gene, 42068
1700030N03Rik 19 3153799 to 3197703 43904 - lincRNA gene RIKEN cDNA 1700030N03 gene
Cpgi10361 19 3205542 to 3205999 457 CpG island CpG island 10361
Tssr154169 19 3205578 to 3205593 15 + TSS region transcription start site region 154169
Tssr154170 19 3205595 to 3205622 27 + TSS region transcription start site region 154170
Tssr154171 19 3205632 to 3205641 9 + TSS region transcription start site region 154171
Tssr154172 19 3205831 to 3205862 31 + TSS region transcription start site region 154172
Tssr154173 19 3205909 to 3205915 6 + TSS region transcription start site region 154173
Gm7798 19 3248804 to 3250214 1410 + pseudogene predicted gene 7798
Gm2106 19 3253518 to 3255067 1549 - pseudogene predicted gene 2106
Ighmbp2 19 3260924 to 3283017 22093 - protein coding gene immunoglobulin mu binding protein 2
D19Mit32 19 3278551 to 3278703 152 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 32
Lfp3 19 3278551 to 3278703 152 QTL long free running period 3
Cpgi10362 19 3282485 to 3283360 875 CpG island CpG island 10362
Tssr157382 19 3282801 to 3282853 52 - TSS region transcription start site region 157382
Mrpl21 19 3282920 to 3292837 9917 + protein coding gene mitochondrial ribosomal protein L21
Tssr157383 19 3282958 to 3283048 90 - TSS region transcription start site region 157383
Tssr154174 19 3283035 to 3283071 36 + TSS region transcription start site region 154174
Mir6984 19 3288920 to 3288983 63 + miRNA gene microRNA 6984
Tgct2 19 20562299 to 3278551 -17283748 QTL testicular germ cell tumor 2