Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:30547598-31618394

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq3 19 27566000 to 31134000 3568000 QTL methacholine sensitivity QTL 3, final
Dkk1 19 30545876 to 30549496 3620 - protein coding gene dickkopf WNT signaling pathway inhibitor 1
Cpgi10751 19 30548626 to 30549537 911 CpG island CpG island 10751
Tssr158805 19 30549516 to 30549520 4 - TSS region transcription start site region 158805
Prkg1 19 30567551 to 31765033 1197482 - protein coding gene protein kinase, cGMP-dependent, type I
Tssr158806 19 30574146 to 30574157 11 - TSS region transcription start site region 158806
Tssr158807 19 30574170 to 30574179 9 - TSS region transcription start site region 158807
Tssr155931 19 30587400 to 30587402 2 + TSS region transcription start site region 155931
Tssr158808 19 30625449 to 30625462 13 - TSS region transcription start site region 158808
Tssr158809 19 30625485 to 30625496 11 - TSS region transcription start site region 158809
Tssr158810 19 30625515 to 30625537 22 - TSS region transcription start site region 158810
Tssr158811 19 30674591 to 30674595 4 - TSS region transcription start site region 158811
Tssr158812 19 30681861 to 30681865 4 - TSS region transcription start site region 158812
Gm23426 19 30704081 to 30704398 317 + unclassified non-coding RNA gene predicted gene, 23426
D19Dcr83 19 30866577 to 30866672 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 83
Gm19023 19 30878834 to 30879352 518 + pseudogene predicted gene, 19023
Gm6642 19 30930380 to 30930962 582 - pseudogene predicted gene 6642
Tssr155932 19 30963863 to 30963872 9 + TSS region transcription start site region 155932
Tssr158813 19 31079696 to 31079697 1 - TSS region transcription start site region 158813
Cpgi10752 19 31082598 to 31083394 796 CpG island CpG island 10752
Cstf2t 19 31082841 to 31086590 3749 + protein coding gene cleavage stimulation factor, 3' pre-RNA subunit 2, tau
Tssr155933 19 31082882 to 31082902 20 + TSS region transcription start site region 155933
Tssr155934 19 31082982 to 31083046 64 + TSS region transcription start site region 155934
Tssr155935 19 31085545 to 31085549 4 + TSS region transcription start site region 155935
Tssr155936 19 31113926 to 31113943 17 + TSS region transcription start site region 155936
Tssr158814 19 31119933 to 31119942 9 - TSS region transcription start site region 158814
Tssr158815 19 31126097 to 31126106 9 - TSS region transcription start site region 158815
Gm41834 19 31127685 to 31137532 9847 + lncRNA gene predicted gene, 41834
8430431K14Rik 19 31213543 to 31216396 2853 - lncRNA gene RIKEN cDNA 8430431K14 gene
D19Dcr84 19 31301441 to 31301536 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 84
Tssr158816 19 31351460 to 31351470 10 - TSS region transcription start site region 158816
Tssr158817 19 31451561 to 31451562 1 - TSS region transcription start site region 158817
9030425L15Rik 19 31505321 to 31507368 2047 unclassified gene RIKEN cDNA 9030425L15 gene
Tssr158818 19 31511010 to 31511015 5 - TSS region transcription start site region 158818
9330185G11Rik 19 31542569 to 31550539 7970 unclassified gene RIKEN cDNA 9330185G11 gene