Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:30498543-31931396

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mcsq3 19 27566000 to 31134000 3568000 QTL methacholine sensitivity QTL 3, final
Ppp1r2-ps3 19 30538928 to 30539554 626 - pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 3
Cpgi10750 19 30539517 to 30539821 304 CpG island CpG island 10750
Tssr158804 19 30539700 to 30539726 26 - TSS region transcription start site region 158804
Dkk1 19 30545876 to 30549496 3620 - protein coding gene dickkopf WNT signaling pathway inhibitor 1
Cpgi10751 19 30548626 to 30549537 911 CpG island CpG island 10751
Tssr158805 19 30549516 to 30549520 4 - TSS region transcription start site region 158805
Prkg1 19 30567551 to 31765033 1197482 - protein coding gene protein kinase, cGMP-dependent, type I
Tssr158806 19 30574146 to 30574157 11 - TSS region transcription start site region 158806
Tssr158807 19 30574170 to 30574179 9 - TSS region transcription start site region 158807
Tssr155931 19 30587400 to 30587402 2 + TSS region transcription start site region 155931
Tssr158808 19 30625449 to 30625462 13 - TSS region transcription start site region 158808
Tssr158809 19 30625485 to 30625496 11 - TSS region transcription start site region 158809
Tssr158810 19 30625515 to 30625537 22 - TSS region transcription start site region 158810
Tssr158811 19 30674591 to 30674595 4 - TSS region transcription start site region 158811
Tssr158812 19 30681861 to 30681865 4 - TSS region transcription start site region 158812
Gm23426 19 30704081 to 30704398 317 + unclassified non-coding RNA gene predicted gene, 23426
D19Dcr83 19 30866577 to 30866672 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 83
Gm19023 19 30878834 to 30879352 518 + pseudogene predicted gene, 19023
Gm6642 19 30930380 to 30930962 582 - pseudogene predicted gene 6642
Tssr155932 19 30963863 to 30963872 9 + TSS region transcription start site region 155932
Tssr158813 19 31079696 to 31079697 1 - TSS region transcription start site region 158813
Cpgi10752 19 31082598 to 31083394 796 CpG island CpG island 10752
Cstf2t 19 31082841 to 31086590 3749 + protein coding gene cleavage stimulation factor, 3' pre-RNA subunit 2, tau
Tssr155933 19 31082882 to 31082902 20 + TSS region transcription start site region 155933
Tssr155934 19 31082982 to 31083046 64 + TSS region transcription start site region 155934
Tssr155935 19 31085545 to 31085549 4 + TSS region transcription start site region 155935
Tssr155936 19 31113926 to 31113943 17 + TSS region transcription start site region 155936
Tssr158814 19 31119933 to 31119942 9 - TSS region transcription start site region 158814
Tssr158815 19 31126097 to 31126106 9 - TSS region transcription start site region 158815
Gm41834 19 31127685 to 31137532 9847 + lncRNA gene predicted gene, 41834
8430431K14Rik 19 31213543 to 31216396 2853 - lncRNA gene RIKEN cDNA 8430431K14 gene
D19Dcr84 19 31301441 to 31301536 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 84
Tssr158816 19 31351460 to 31351470 10 - TSS region transcription start site region 158816
Tssr158817 19 31451561 to 31451562 1 - TSS region transcription start site region 158817
9030425L15Rik 19 31505321 to 31507368 2047 unclassified gene RIKEN cDNA 9030425L15 gene
Tssr158818 19 31511010 to 31511015 5 - TSS region transcription start site region 158818
9330185G11Rik 19 31542569 to 31550539 7970 unclassified gene RIKEN cDNA 9330185G11 gene
Tssr158819 19 31624502 to 31624503 1 - TSS region transcription start site region 158819
D19Ertd200e 19 31649317 to 31649534 217 DNA segment DNA segment, Chr 19, ERATO Doi 200, expressed
Cpgi10753 19 31663757 to 31664993 1236 CpG island CpG island 10753
Tssr158820 19 31664356 to 31664372 16 - TSS region transcription start site region 158820
Tssr158821 19 31664375 to 31664443 68 - TSS region transcription start site region 158821
Tssr158822 19 31664606 to 31664618 12 - TSS region transcription start site region 158822
Tssr158823 19 31664654 to 31664690 36 - TSS region transcription start site region 158823
Cpgi10754 19 31762754 to 31763030 276 CpG island CpG island 10754
Cpgi10755 19 31764020 to 31765052 1032 CpG island CpG island 10755
Tssr158824 19 31764963 to 31764990 27 - TSS region transcription start site region 158824
Tssr158825 19 31765000 to 31765015 15 - TSS region transcription start site region 158825
Tssr158826 19 31765027 to 31765079 52 - TSS region transcription start site region 158826
Tssr158827 19 31765238 to 31765283 45 - TSS region transcription start site region 158827
Tssr155937 19 31868754 to 31868787 33 + TSS region transcription start site region 155937
A1cf 19 31868764 to 31948573 79809 + protein coding gene APOBEC1 complementation factor
Tssr155938 19 31868805 to 31868820 15 + TSS region transcription start site region 155938
Tssr155939 19 31873530 to 31873543 13 + TSS region transcription start site region 155939
Tssr155940 19 31881954 to 31881973 19 + TSS region transcription start site region 155940
Tssr5477 19 31910374 to 31910380 6 - TSS region transcription start site region 5477
Tssr158828 19 31910421 to 31910435 14 - TSS region transcription start site region 158828
Tssr158829 19 31910439 to 31910454 15 - TSS region transcription start site region 158829
Tssr158830 19 31910465 to 31910478 13 - TSS region transcription start site region 158830
Tssr155941 19 31910760 to 31910772 12 + TSS region transcription start site region 155941
Gm19241 19 31913644 to 31914551 907 + pseudogene predicted gene, 19241
Tssr158831 19 31914076 to 31914082 6 - TSS region transcription start site region 158831
Tssr155942 19 31914329 to 31914335 6 + TSS region transcription start site region 155942