Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:30190876-30904496

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr155930 19 30232921 to 30232940 19 + TSS region transcription start site region 155930
Mbl2 19 30232928 to 30239685 6757 + protein coding gene mannose-binding lectin (protein C) 2
Gm24108 19 30261441 to 30261517 76 - miRNA gene predicted gene, 24108
Gm24883 19 30264880 to 30265160 280 + unclassified non-coding RNA gene predicted gene, 24883
Gm36006 19 30352005 to 30355618 3613 - pseudogene predicted gene, 36006
1700048J15Rik 19 30358216 to 30360679 2463 unclassified gene RIKEN cDNA 1700048J15 gene
Tssr158803 19 30363315 to 30363319 4 - TSS region transcription start site region 158803
Gm36319 19 30371465 to 30395327 23862 - lncRNA gene predicted gene, 36319
Gm17885 19 30490848 to 30491363 515 - pseudogene predicted gene, 17885
Ppp1r2-ps3 19 30538928 to 30539554 626 - pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 3
Cpgi10750 19 30539517 to 30539821 304 CpG island CpG island 10750
Tssr158804 19 30539700 to 30539726 26 - TSS region transcription start site region 158804
Dkk1 19 30545876 to 30549496 3620 - protein coding gene dickkopf WNT signaling pathway inhibitor 1
Cpgi10751 19 30548626 to 30549537 911 CpG island CpG island 10751
Tssr158805 19 30549516 to 30549520 4 - TSS region transcription start site region 158805
Prkg1 19 30567551 to 31765033 1197482 - protein coding gene protein kinase, cGMP-dependent, type I
Tssr158806 19 30574146 to 30574157 11 - TSS region transcription start site region 158806
Tssr158807 19 30574170 to 30574179 9 - TSS region transcription start site region 158807
Tssr155931 19 30587400 to 30587402 2 + TSS region transcription start site region 155931
Tssr158808 19 30625449 to 30625462 13 - TSS region transcription start site region 158808
Tssr158809 19 30625485 to 30625496 11 - TSS region transcription start site region 158809
Tssr158810 19 30625515 to 30625537 22 - TSS region transcription start site region 158810
Tssr158811 19 30674591 to 30674595 4 - TSS region transcription start site region 158811
Tssr158812 19 30681861 to 30681865 4 - TSS region transcription start site region 158812
Gm23426 19 30704081 to 30704398 317 + unclassified non-coding RNA gene predicted gene, 23426
D19Dcr83 19 30866577 to 30866672 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 83
Gm19023 19 30878834 to 30879352 518 + pseudogene predicted gene, 19023