Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:30032921-30432940

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Uhrf2 19 30030513 to 30093722 63209 + protein coding gene ubiquitin-like, containing PHD and RING finger domains 2
Tssr155925 19 30035500 to 30035535 35 + TSS region transcription start site region 155925
Tssr155926 19 30042759 to 30042787 28 + TSS region transcription start site region 155926
Tssr155927 19 30056997 to 30057011 14 + TSS region transcription start site region 155927
Tssr155928 19 30060380 to 30060384 4 + TSS region transcription start site region 155928
Gldc 19 30098449 to 30175418 76969 - protein coding gene glycine decarboxylase
Tssr158793 19 30100902 to 30100920 18 - TSS region transcription start site region 158793
Tssr158794 19 30105336 to 30105346 10 - TSS region transcription start site region 158794
Tssr158795 19 30115243 to 30115247 4 - TSS region transcription start site region 158795
Tssr158796 19 30115263 to 30115272 9 - TSS region transcription start site region 158796
Tssr158797 19 30115349 to 30115365 16 - TSS region transcription start site region 158797
Rpl31-ps20 19 30160620 to 30160997 377 + pseudogene ribosomal protein L31, pseudogene 20
9530025L08Rik 19 30164750 to 30165768 1018 unclassified gene RIKEN cDNA 9530025L08 gene
Cpgi10748 19 30167209 to 30167630 421 CpG island CpG island 10748
Cpgi10749 19 30174606 to 30175697 1091 CpG island CpG island 10749
Tssr158798 19 30175379 to 30175394 15 - TSS region transcription start site region 158798
Tssr158799 19 30175395 to 30175406 11 - TSS region transcription start site region 158799
Tssr158800 19 30175414 to 30175436 22 - TSS region transcription start site region 158800
Tssr158801 19 30175443 to 30175466 23 - TSS region transcription start site region 158801
Tssr158802 19 30175474 to 30175487 13 - TSS region transcription start site region 158802
Tssr155929 19 30185873 to 30185885 12 + TSS region transcription start site region 155929
Tssr155930 19 30232921 to 30232940 19 + TSS region transcription start site region 155930
Mbl2 19 30232928 to 30239685 6757 + protein coding gene mannose-binding lectin (protein C) 2
Gm24108 19 30261441 to 30261517 76 - miRNA gene predicted gene, 24108
Gm24883 19 30264880 to 30265160 280 + unclassified non-coding RNA gene predicted gene, 24883
Gm36006 19 30352005 to 30355618 3613 - pseudogene predicted gene, 36006
1700048J15Rik 19 30358216 to 30360679 2463 unclassified gene RIKEN cDNA 1700048J15 gene
Tssr158803 19 30363315 to 30363319 4 - TSS region transcription start site region 158803
Gm36319 19 30371465 to 30395327 23862 - lncRNA gene predicted gene, 36319