MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:2989204-3279205

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-TLaag3	19	3066556 to 3066627	71	+	tRNA gene	nuclear encoded tRNA leucine 3 (anticodon AAG)
Gm38527	19	3066816 to 3072894	6078	-	lncRNA gene	predicted gene, 38527
1200015M12Rik	19	3083614 to 3087406	3792		unclassified gene	RIKEN cDNA 1200015M12 gene
Tssr154168	19	3134204 to 3134205	1	+	TSS region	transcription start site region 154168
Gm25431	19	3136984 to 3137090	106	-	snRNA gene	predicted gene, 25431
Gm42068	19	3146684 to 3157399	10715	+	pseudogene	predicted gene, 42068
1700030N03Rik	19	3153799 to 3197703	43904	-	lincRNA gene	RIKEN cDNA 1700030N03 gene
Cpgi10361	19	3205542 to 3205999	457		CpG island	CpG island 10361
Tssr154169	19	3205578 to 3205593	15	+	TSS region	transcription start site region 154169
Tssr154170	19	3205595 to 3205622	27	+	TSS region	transcription start site region 154170
Tssr154171	19	3205632 to 3205641	9	+	TSS region	transcription start site region 154171
Tssr154172	19	3205831 to 3205862	31	+	TSS region	transcription start site region 154172
Tssr154173	19	3205909 to 3205915	6	+	TSS region	transcription start site region 154173
Gm7798	19	3248804 to 3250214	1410	+	pseudogene	predicted gene 7798
Gm2106	19	3253518 to 3255067	1549	-	pseudogene	predicted gene 2106
Ighmbp2	19	3260924 to 3283017	22093	-	protein coding gene	immunoglobulin mu binding protein 2
D19Mit32	19	3278551 to 3278703	152		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 32
Lfp3	19	3278551 to 3278703	152		QTL	long free running period 3
Tgct2	19	20562299 to 3278551	-17283748		QTL	testicular germ cell tumor 2