Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:29768897-30058998

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9930021J03Rik 19 29714402 to 29805989 91587 - protein coding gene RIKEN cDNA 9930021J03 gene
Tssr158786 19 29787306 to 29787312 6 - TSS region transcription start site region 158786
Cpgi10743 19 29804882 to 29806711 1829 CpG island CpG island 10743
Tssr155910 19 29805269 to 29805293 24 + TSS region transcription start site region 155910
Tssr5475 19 29806180 to 29806207 27 + TSS region transcription start site region 5475
Tssr158787 19 29806384 to 29806435 51 - TSS region transcription start site region 158787
Tssr158788 19 29806531 to 29806552 21 - TSS region transcription start site region 158788
Ranbp6 19 29808400 to 29812974 4574 - protein coding gene RAN binding protein 6
Cpgi10744 19 29812740 to 29813258 518 CpG island CpG island 10744
Tssr158789 19 29812952 to 29812974 22 - TSS region transcription start site region 158789
Tssr5476 19 29812982 to 29812991 9 - TSS region transcription start site region 5476
Gm41832 19 29838453 to 29927333 88880 - lncRNA gene predicted gene, 41832
Tssr158790 19 29865222 to 29865257 35 - TSS region transcription start site region 158790
Gm36209 19 29877449 to 29884689 7240 + lncRNA gene predicted gene, 36209
Gm41831 19 29893703 to 29896235 2532 + lncRNA gene predicted gene, 41831
D19Dcr81 19 29913897 to 29913998 101 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 81
Tssr155911 19 29925107 to 29925122 15 + TSS region transcription start site region 155911
Il33 19 29925114 to 29960715 35601 + protein coding gene interleukin 33
Tssr158791 19 29926383 to 29926401 18 - TSS region transcription start site region 158791
Tssr155912 19 29945741 to 29945752 11 + TSS region transcription start site region 155912
Tssr155913 19 29945782 to 29945799 17 + TSS region transcription start site region 155913
Cpgi10745 19 29948553 to 29948821 268 CpG island CpG island 10745
Tssr155914 19 29951765 to 29951779 14 + TSS region transcription start site region 155914
Tssr155915 19 29951808 to 29951819 11 + TSS region transcription start site region 155915
Tssr155916 19 29959067 to 29959072 5 + TSS region transcription start site region 155916
Tssr155917 19 29959513 to 29959521 8 + TSS region transcription start site region 155917
Cpgi10746 19 29984890 to 29985119 229 CpG island CpG island 10746
Gm26046 19 29986099 to 29986264 165 + snRNA gene predicted gene, 26046
D19Dcr82 19 29990397 to 29990492 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 82
Tssr155918 19 30003777 to 30003813 36 + TSS region transcription start site region 155918
Trpd52l3 19 30003790 to 30006020 2230 + protein coding gene tumor protein D52-like 3
Tssr155919 19 30003820 to 30003834 14 + TSS region transcription start site region 155919
Cpgi10747 19 30029875 to 30031432 1557 CpG island CpG island 10747
Tssr158792 19 30030317 to 30030346 29 - TSS region transcription start site region 158792
Tssr155920 19 30030419 to 30030430 11 + TSS region transcription start site region 155920
Tssr155921 19 30030439 to 30030528 89 + TSS region transcription start site region 155921
Uhrf2 19 30030513 to 30093722 63209 + protein coding gene ubiquitin-like, containing PHD and RING finger domains 2
Tssr155922 19 30030615 to 30030634 19 + TSS region transcription start site region 155922
Tssr155923 19 30030642 to 30030653 11 + TSS region transcription start site region 155923
Tssr155924 19 30030663 to 30030672 9 + TSS region transcription start site region 155924
Tssr155925 19 30035500 to 30035535 35 + TSS region transcription start site region 155925
Tssr155926 19 30042759 to 30042787 28 + TSS region transcription start site region 155926
Tssr155927 19 30056997 to 30057011 14 + TSS region transcription start site region 155927