Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:28963198-29133207

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4430402I18Rik 19 28906829 to 28968356 61527 - protein coding gene RIKEN cDNA 4430402I18 gene
Cpgi10730 19 28963638 to 28964931 1293 CpG island CpG island 10730
Tssr155752 19 28963851 to 28963877 26 + TSS region transcription start site region 155752
Tssr158738 19 28963863 to 28963893 30 - TSS region transcription start site region 158738
Tssr155753 19 28963892 to 28963969 77 + TSS region transcription start site region 155753
Plpp6 19 28963953 to 28966811 2858 + protein coding gene phospholipid phosphatase 6
Tssr158739 19 28967794 to 28967852 58 - TSS region transcription start site region 158739
Gm3621 19 28973307 to 28974077 770 + pseudogene predicted gene 3621
Gm4844 19 28974550 to 28975633 1083 - pseudogene predicted gene 4844
Cpgi10731 19 28975037 to 28975460 423 CpG island CpG island 10731
Tssr158740 19 28975634 to 28975644 10 - TSS region transcription start site region 158740
Tssr158741 19 28975654 to 28975667 13 - TSS region transcription start site region 158741
Cpgi10732 19 28990153 to 28991203 1050 CpG island CpG island 10732
Tssr155754 19 28990347 to 28990373 26 + TSS region transcription start site region 155754
Cdc37l1 19 28990352 to 29026681 36329 + protein coding gene cell division cycle 37-like 1
Tssr155755 19 28990375 to 28990392 17 + TSS region transcription start site region 155755
Tssr155756 19 28990453 to 28990466 13 + TSS region transcription start site region 155756
Tssr155757 19 28990476 to 28990497 21 + TSS region transcription start site region 155757
Tssr158742 19 28990894 to 28990929 35 - TSS region transcription start site region 158742
Tssr5472 19 28995180 to 28995195 15 + TSS region transcription start site region 5472
Tssr155758 19 28995203 to 28995213 10 + TSS region transcription start site region 155758
Gm10136 19 29003408 to 29003842 434 - pseudogene predicted pseudogene 10136
Ak3 19 29020833 to 29047961 27128 - protein coding gene adenylate kinase 3
Tssr158743 19 29021305 to 29021324 19 - TSS region transcription start site region 158743
Tssr158744 19 29021863 to 29021903 40 - TSS region transcription start site region 158744
D19Dcr13 19 29042415 to 29042510 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 13
Tssr155759 19 29046483 to 29046513 30 + TSS region transcription start site region 155759
Cpgi10733 19 29047385 to 29048306 921 CpG island CpG island 10733
1700018L02Rik 19 29047483 to 29048729 1246 + antisense lncRNA gene RIKEN cDNA 1700018L02 gene
Tssr155760 19 29047489 to 29047527 38 + TSS region transcription start site region 155760
Tssr155761 19 29047529 to 29047534 5 + TSS region transcription start site region 155761
Tssr155762 19 29047535 to 29047580 45 + TSS region transcription start site region 155762
Tssr155763 19 29047585 to 29047594 9 + TSS region transcription start site region 155763
Tssr155764 19 29047601 to 29047607 6 + TSS region transcription start site region 155764
Tssr158745 19 29047832 to 29047844 12 - TSS region transcription start site region 158745
Tssr158746 19 29047847 to 29047977 130 - TSS region transcription start site region 158746
Tssr158747 19 29048076 to 29048081 5 - TSS region transcription start site region 158747
Tssr155765 19 29048198 to 29048207 9 + TSS region transcription start site region 155765
Tssr155766 19 29067234 to 29067245 11 + TSS region transcription start site region 155766
Tssr155767 19 29067271 to 29067297 26 + TSS region transcription start site region 155767
Gm9895 19 29067301 to 29069503 2202 + lncRNA gene predicted gene 9895
Tssr155768 19 29067307 to 29067327 20 + TSS region transcription start site region 155768
Tssr155769 19 29067341 to 29067353 12 + TSS region transcription start site region 155769
Tssr5473 19 29068707 to 29068713 6 + TSS region transcription start site region 5473
Tssr155770 19 29081736 to 29081752 16 + TSS region transcription start site region 155770
Cpgi10734 19 29100830 to 29101938 1108 CpG island CpG island 10734
Tssr5474 19 29101147 to 29101153 6 - TSS region transcription start site region 5474
Tssr155771 19 29101365 to 29101376 11 + TSS region transcription start site region 155771
Rcl1 19 29101375 to 29143843 42468 + protein coding gene RNA terminal phosphate cyclase-like 1
Tssr155772 19 29101387 to 29101438 51 + TSS region transcription start site region 155772
Tssr155773 19 29101441 to 29101452 11 + TSS region transcription start site region 155773
Tssr155774 19 29101484 to 29101497 13 + TSS region transcription start site region 155774
Tssr155775 19 29121799 to 29121802 3 + TSS region transcription start site region 155775
Tssr155776 19 29126746 to 29126763 17 + TSS region transcription start site region 155776