Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:28893892-29033969

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc1a1 19 28835166 to 28913960 78794 + protein coding gene solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
4430402I18Rik 19 28906829 to 28968356 61527 - protein coding gene RIKEN cDNA 4430402I18 gene
Tssr158736 19 28929126 to 28929131 5 - TSS region transcription start site region 158736
Tssr158737 19 28929223 to 28929237 14 - TSS region transcription start site region 158737
D19Dcr12 19 28955176 to 28955274 98 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 12
Cpgi10730 19 28963638 to 28964931 1293 CpG island CpG island 10730
Tssr155752 19 28963851 to 28963877 26 + TSS region transcription start site region 155752
Tssr158738 19 28963863 to 28963893 30 - TSS region transcription start site region 158738
Tssr155753 19 28963892 to 28963969 77 + TSS region transcription start site region 155753
Plpp6 19 28963953 to 28966811 2858 + protein coding gene phospholipid phosphatase 6
Tssr158739 19 28967794 to 28967852 58 - TSS region transcription start site region 158739
Gm3621 19 28973307 to 28974077 770 + pseudogene predicted gene 3621
Gm4844 19 28974550 to 28975633 1083 - pseudogene predicted gene 4844
Cpgi10731 19 28975037 to 28975460 423 CpG island CpG island 10731
Tssr158740 19 28975634 to 28975644 10 - TSS region transcription start site region 158740
Tssr158741 19 28975654 to 28975667 13 - TSS region transcription start site region 158741
Cpgi10732 19 28990153 to 28991203 1050 CpG island CpG island 10732
Tssr155754 19 28990347 to 28990373 26 + TSS region transcription start site region 155754
Cdc37l1 19 28990352 to 29026681 36329 + protein coding gene cell division cycle 37-like 1
Tssr155755 19 28990375 to 28990392 17 + TSS region transcription start site region 155755
Tssr155756 19 28990453 to 28990466 13 + TSS region transcription start site region 155756
Tssr155757 19 28990476 to 28990497 21 + TSS region transcription start site region 155757
Tssr158742 19 28990894 to 28990929 35 - TSS region transcription start site region 158742
Tssr5472 19 28995180 to 28995195 15 + TSS region transcription start site region 5472
Tssr155758 19 28995203 to 28995213 10 + TSS region transcription start site region 155758
Gm10136 19 29003408 to 29003842 434 - pseudogene predicted pseudogene 10136
Ak3 19 29020833 to 29047961 27128 - protein coding gene adenylate kinase 3
Tssr158743 19 29021305 to 29021324 19 - TSS region transcription start site region 158743
Tssr158744 19 29021863 to 29021903 40 - TSS region transcription start site region 158744