Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:28522159-28962551

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Glis3 19 28258851 to 28680077 421226 - protein coding gene GLIS family zinc finger 3
D19Dcr10 19 28555884 to 28555979 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 10
Tssr158726 19 28560975 to 28560987 12 - TSS region transcription start site region 158726
Tssr158727 19 28561017 to 28561025 8 - TSS region transcription start site region 158727
Tssr158728 19 28561066 to 28561083 17 - TSS region transcription start site region 158728
Tssr155748 19 28578188 to 28578202 14 + TSS region transcription start site region 155748
4933413C19Rik 19 28580533 to 28583294 2761 - sense intronic lncRNA gene RIKEN cDNA 4933413C19 gene
Cpgi10727 19 28678088 to 28678510 422 CpG island CpG island 10727
D930032P07Rik 19 28678224 to 28720027 41803 + lincRNA gene RIKEN cDNA D930032P07 gene
Cpgi10728 19 28678785 to 28680407 1622 CpG island CpG island 10728
Tssr158729 19 28680110 to 28680122 12 - TSS region transcription start site region 158729
Tssr158730 19 28680132 to 28680143 11 - TSS region transcription start site region 158730
Tssr158731 19 28680165 to 28680183 18 - TSS region transcription start site region 158731
Tssr158732 19 28680202 to 28680267 65 - TSS region transcription start site region 158732
D19Dcr11 19 28691324 to 28691419 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 11
Rps15a-ps2 19 28742159 to 28742551 392 - pseudogene ribosomal protein S15A, pseudogene 2
Tssr158733 19 28742578 to 28742588 10 - TSS region transcription start site region 158733
Gm35922 19 28760033 to 28788185 28152 + lncRNA gene predicted gene, 35922
Gm6788 19 28763161 to 28763430 269 - pseudogene predicted gene 6788
Tssr158734 19 28763537 to 28763540 3 - TSS region transcription start site region 158734
Gm26942 19 28812406 to 28813202 796 - pseudogene predicted gene, 26942
Cpgi10729 19 28834608 to 28835796 1188 CpG island CpG island 10729
Tssr155749 19 28835101 to 28835116 15 + TSS region transcription start site region 155749
Tssr155750 19 28835124 to 28835142 18 + TSS region transcription start site region 155750
Slc1a1 19 28835166 to 28913960 78794 + protein coding gene solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
Gm5822 19 28862330 to 28863707 1377 - pseudogene predicted gene 5822
Tssr158735 19 28863766 to 28863767 1 - TSS region transcription start site region 158735
Tssr155751 19 28893040 to 28893043 3 + TSS region transcription start site region 155751
4430402I18Rik 19 28906829 to 28968356 61527 - protein coding gene RIKEN cDNA 4430402I18 gene
Tssr158736 19 28929126 to 28929131 5 - TSS region transcription start site region 158736
Tssr158737 19 28929223 to 28929237 14 - TSS region transcription start site region 158737
D19Dcr12 19 28955176 to 28955274 98 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 12