Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:26739765-27299769

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smarca2 19 26605088 to 26778321 173233 + protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Cpgi10721 19 26747756 to 26748070 314 CpG island CpG island 10721
Tssr155720 19 26748390 to 26748474 84 + TSS region transcription start site region 155720
Tssr155721 19 26749838 to 26749877 39 + TSS region transcription start site region 155721
Tssr155722 19 26749883 to 26749918 35 + TSS region transcription start site region 155722
Tssr155723 19 26750954 to 26750967 13 + TSS region transcription start site region 155723
Tssr155724 19 26753588 to 26753603 15 + TSS region transcription start site region 155724
Tssr155725 19 26753652 to 26753662 10 + TSS region transcription start site region 155725
4931403E22Rik 19 26768801 to 26823907 55106 - lncRNA gene RIKEN cDNA 4931403E22 gene
Tssr155726 19 26770926 to 26770956 30 + TSS region transcription start site region 155726
Tssr155727 19 26781757 to 26781760 3 + TSS region transcription start site region 155727
Gm18380 19 26802040 to 26803219 1179 + pseudogene predicted gene, 18380
Pgia23 19 26810053 to 26810202 149 QTL proteoglycan induced arthritis 23
D19Mit30 19 26810053 to 26810202 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 30
Gm46648 19 26823866 to 26872509 48643 + lncRNA gene predicted gene, 46648
Gm815 19 26885925 to 26888639 2714 + protein coding gene predicted gene 815
D19Dcr6 19 26987131 to 26987238 107 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 6
D19Mit131 19 26991258 to 26991371 113 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 131
Cpgi10722 19 27009804 to 27009963 159 CpG island CpG island 10722
Tssr155728 19 27019765 to 27019769 4 + TSS region transcription start site region 155728
Gm35438 19 27101951 to 27316698 214747 - lncRNA gene predicted gene, 35438
D19Dcr7 19 27202598 to 27202698 100 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 7
Vldlr 19 27216489 to 27254231 37742 + protein coding gene very low density lipoprotein receptor
Cpgi10723 19 27216616 to 27219235 2619 CpG island CpG island 10723
Tssr155729 19 27216881 to 27216891 10 + TSS region transcription start site region 155729
Tssr155730 19 27217011 to 27217042 31 + TSS region transcription start site region 155730
Tssr155731 19 27217047 to 27217056 9 + TSS region transcription start site region 155731
Tssr5469 19 27217069 to 27217077 8 + TSS region transcription start site region 5469
Tssr155732 19 27217101 to 27217131 30 + TSS region transcription start site region 155732
Tssr155733 19 27217406 to 27217424 18 + TSS region transcription start site region 155733
Tssr155734 19 27217509 to 27217605 96 + TSS region transcription start site region 155734
Tssr158703 19 27257415 to 27257418 3 - TSS region transcription start site region 158703
Tssr158704 19 27262264 to 27262273 9 - TSS region transcription start site region 158704
Tssr158705 19 27262297 to 27262306 9 - TSS region transcription start site region 158705
Tssr158706 19 27262317 to 27262328 11 - TSS region transcription start site region 158706