Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:25835369-26685493

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34516 19 25775487 to 25946975 171488 + lncRNA gene predicted gene, 34516
1700048O14Rik 19 26030730 to 26046626 15896 - lncRNA gene RIKEN cDNA 1700048O14 gene
Tssr158699 19 26046441 to 26046452 11 - TSS region transcription start site region 158699
Tssr158700 19 26046461 to 26046469 8 - TSS region transcription start site region 158700
Gm25176 19 26260369 to 26260493 124 - snRNA gene predicted gene, 25176
Tssr158701 19 26260490 to 26260495 5 - TSS region transcription start site region 158701
D19Mit86 19 26328315 to 26328421 106 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 86
dblr 19 26328315 to 37257062 10928747 heritable phenotypic marker doubleridge
Iba4 19 26328315 to 26328421 106 QTL induction of brown adipocytes 4
Gm34808 19 26482315 to 26509084 26769 - lncRNA gene predicted gene, 34808
Gm41828 19 26510339 to 26527796 17457 + lncRNA gene predicted gene, 41828
Gm48775 19 26572996 to 26584672 11676 + lincRNA gene predicted gene, 48775
Cpgi10718 19 26604475 to 26605613 1138 CpG island CpG island 10718
Smarca2 19 26605088 to 26778321 173233 + protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Tssr155705 19 26605106 to 26605117 11 + TSS region transcription start site region 155705
Tssr155706 19 26605125 to 26605156 31 + TSS region transcription start site region 155706
Tssr155707 19 26605164 to 26605185 21 + TSS region transcription start site region 155707
Tssr155708 19 26605191 to 26605196 5 + TSS region transcription start site region 155708
Cpgi10719 19 26605742 to 26608099 2357 CpG island CpG island 10719
Tssr155709 19 26606433 to 26606457 24 + TSS region transcription start site region 155709
Tssr155710 19 26606611 to 26606639 28 + TSS region transcription start site region 155710
Tssr155711 19 26606736 to 26606809 73 + TSS region transcription start site region 155711
Tssr155712 19 26607182 to 26607226 44 + TSS region transcription start site region 155712
Tssr155713 19 26607231 to 26607256 25 + TSS region transcription start site region 155713
Tssr155714 19 26607375 to 26607410 35 + TSS region transcription start site region 155714
Tssr155715 19 26607439 to 26607497 58 + TSS region transcription start site region 155715
Gm20616 19 26620822 to 26623419 2597 - lncRNA gene predicted gene 20616
Tssr155716 19 26621983 to 26621987 4 + TSS region transcription start site region 155716
Tssr158702 19 26623394 to 26623431 37 - TSS region transcription start site region 158702
Tssr155717 19 26623401 to 26623418 17 + TSS region transcription start site region 155717
Tssr155718 19 26623419 to 26623471 52 + TSS region transcription start site region 155718
Tssr155719 19 26623941 to 26623960 19 + TSS region transcription start site region 155719
Cpgi10720 19 26640442 to 26640604 162 CpG island CpG island 10720