Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:25810490-26710495

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34516 19 25775487 to 25946975 171488 + lncRNA gene predicted gene, 34516
1700048O14Rik 19 26030730 to 26046626 15896 - lncRNA gene RIKEN cDNA 1700048O14 gene
Tssr158699 19 26046441 to 26046452 11 - TSS region transcription start site region 158699
Tssr158700 19 26046461 to 26046469 8 - TSS region transcription start site region 158700
Gm25176 19 26260369 to 26260493 124 - snRNA gene predicted gene, 25176
Tssr158701 19 26260490 to 26260495 5 - TSS region transcription start site region 158701
dblr 19 26328315 to 37257062 10928747 heritable phenotypic marker doubleridge
Iba4 19 26328315 to 26328421 106 QTL induction of brown adipocytes 4
D19Mit86 19 26328315 to 26328421 106 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 86
Gm34808 19 26482315 to 26509084 26769 - lncRNA gene predicted gene, 34808
Gm41828 19 26510339 to 26527796 17457 + lncRNA gene predicted gene, 41828
Gm48775 19 26572996 to 26584672 11676 + lincRNA gene predicted gene, 48775
Cpgi10718 19 26604475 to 26605613 1138 CpG island CpG island 10718
Smarca2 19 26605088 to 26778321 173233 + protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Tssr155705 19 26605106 to 26605117 11 + TSS region transcription start site region 155705
Tssr155706 19 26605125 to 26605156 31 + TSS region transcription start site region 155706
Tssr155707 19 26605164 to 26605185 21 + TSS region transcription start site region 155707
Tssr155708 19 26605191 to 26605196 5 + TSS region transcription start site region 155708
Cpgi10719 19 26605742 to 26608099 2357 CpG island CpG island 10719
Tssr155709 19 26606433 to 26606457 24 + TSS region transcription start site region 155709
Tssr155710 19 26606611 to 26606639 28 + TSS region transcription start site region 155710
Tssr155711 19 26606736 to 26606809 73 + TSS region transcription start site region 155711
Tssr155712 19 26607182 to 26607226 44 + TSS region transcription start site region 155712
Tssr155713 19 26607231 to 26607256 25 + TSS region transcription start site region 155713
Tssr155714 19 26607375 to 26607410 35 + TSS region transcription start site region 155714
Tssr155715 19 26607439 to 26607497 58 + TSS region transcription start site region 155715
Gm20616 19 26620822 to 26623419 2597 - lncRNA gene predicted gene 20616
Tssr155716 19 26621983 to 26621987 4 + TSS region transcription start site region 155716
Tssr158702 19 26623394 to 26623431 37 - TSS region transcription start site region 158702
Tssr155717 19 26623401 to 26623418 17 + TSS region transcription start site region 155717
Tssr155718 19 26623419 to 26623471 52 + TSS region transcription start site region 155718
Tssr155719 19 26623941 to 26623960 19 + TSS region transcription start site region 155719
Cpgi10720 19 26640442 to 26640604 162 CpG island CpG island 10720