Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:24689586-25399598

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tlyr1 19 20562164 to 25336432 4774268 QTL thymic lymphoma resistance 1
Pgm5 19 24683016 to 24861855 178839 - protein coding gene phosphoglucomutase 5
Gm17800 19 24692400 to 24693370 970 - pseudogene predicted gene, 17800
Gm38581 19 24706836 to 24713712 6876 + lncRNA gene predicted gene, 38581
Tssr158682 19 24749718 to 24749722 4 - TSS region transcription start site region 158682
Tssr158683 19 24859400 to 24859406 6 - TSS region transcription start site region 158683
Cpgi10697 19 24861428 to 24862218 790 CpG island CpG island 10697
Tssr158684 19 24861801 to 24861824 23 - TSS region transcription start site region 158684
Tssr158685 19 24861828 to 24861844 16 - TSS region transcription start site region 158685
Tssr158686 19 24861858 to 24861865 7 - TSS region transcription start site region 158686
Tssr158687 19 24862162 to 24862173 11 - TSS region transcription start site region 158687
Tssr158688 19 24862180 to 24862197 17 - TSS region transcription start site region 158688
Tssr158689 19 24862221 to 24862232 11 - TSS region transcription start site region 158689
Tssr158690 19 24862241 to 24862291 50 - TSS region transcription start site region 158690
Tssr155627 19 24875621 to 24875639 18 + TSS region transcription start site region 155627
Tssr155628 19 24875662 to 24875667 5 + TSS region transcription start site region 155628
Tssr155629 19 24875679 to 24875689 10 + TSS region transcription start site region 155629
Gm10053 19 24875686 to 24876634 948 + pseudogene predicted gene 10053
Cpgi10698 19 24897130 to 24897980 850 CpG island CpG island 10698
Foxd4 19 24898965 to 24901309 2344 - protein coding gene forkhead box D4
Cpgi10699 19 24899354 to 24901078 1724 CpG island CpG island 10699
Tssr155630 19 24900431 to 24900450 19 + TSS region transcription start site region 155630
Tssr158691 19 24901010 to 24901048 38 - TSS region transcription start site region 158691
Cbwd1 19 24919916 to 24961616 41700 - protein coding gene COBW domain containing 1
Mir3084-1 19 24942235 to 24942303 68 - miRNA gene microRNA 3084-1
Gm23658 19 24942236 to 24942367 131 - snoRNA gene predicted gene, 23658
Cpgi10700 19 24961414 to 24961889 475 CpG island CpG island 10700
Tssr158692 19 24961545 to 24961630 85 - TSS region transcription start site region 158692
Tssr155631 19 24997421 to 24997425 4 + TSS region transcription start site region 155631
Cpgi10701 19 24998902 to 25000072 1170 CpG island CpG island 10701
Tssr155632 19 24999500 to 24999555 55 + TSS region transcription start site region 155632
Dock8 19 24999529 to 25202432 202903 + protein coding gene dedicator of cytokinesis 8
Tssr155633 19 24999569 to 24999580 11 + TSS region transcription start site region 155633
Tssr158693 19 25002910 to 25002935 25 - TSS region transcription start site region 158693
Tssr155634 19 25004643 to 25004674 31 + TSS region transcription start site region 155634
Tssr155635 19 25027990 to 25028003 13 + TSS region transcription start site region 155635
Ndufb4b 19 25033108 to 25033578 470 + protein coding gene NADH:ubiquinone oxidoreductase subunit B4B
Tssr155636 19 25033129 to 25033136 7 + TSS region transcription start site region 155636
Tssr155637 19 25039227 to 25039231 4 + TSS region transcription start site region 155637
Tssr155638 19 25044586 to 25044598 12 + TSS region transcription start site region 155638
Tssr155639 19 25052429 to 25052448 19 + TSS region transcription start site region 155639
Tssr155640 19 25052510 to 25052519 9 + TSS region transcription start site region 155640
Tssr155641 19 25052536 to 25052541 5 + TSS region transcription start site region 155641
Tssr155642 19 25052554 to 25052611 57 + TSS region transcription start site region 155642
Tssr155643 19 25057163 to 25057172 9 + TSS region transcription start site region 155643
Tssr155644 19 25057197 to 25057223 26 + TSS region transcription start site region 155644
Tssr155645 19 25061008 to 25061053 45 + TSS region transcription start site region 155645
D19Mit97 19 25061908 to 25062032 124 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 97
Tssr155646 19 25075596 to 25075600 4 + TSS region transcription start site region 155646
Tssr155647 19 25076535 to 25076538 3 + TSS region transcription start site region 155647
Tssr155648 19 25081698 to 25081704 6 + TSS region transcription start site region 155648
Tssr155649 19 25092446 to 25092457 11 + TSS region transcription start site region 155649
Gm34235 19 25092866 to 25097404 4538 - lncRNA gene predicted gene, 34235
Tssr155650 19 25095395 to 25095410 15 + TSS region transcription start site region 155650
Tssr155651 19 25095425 to 25095434 9 + TSS region transcription start site region 155651
Tssr158694 19 25096455 to 25096470 15 - TSS region transcription start site region 158694
Tssr158695 19 25096487 to 25096503 16 - TSS region transcription start site region 158695
Tssr155652 19 25097235 to 25097246 11 + TSS region transcription start site region 155652
Tssr155653 19 25097805 to 25097815 10 + TSS region transcription start site region 155653
Tssr155654 19 25097859 to 25097908 49 + TSS region transcription start site region 155654
Tssr155655 19 25107807 to 25107809 2 + TSS region transcription start site region 155655
Tssr155656 19 25111560 to 25111563 3 + TSS region transcription start site region 155656
Tssr155657 19 25122285 to 25122291 6 + TSS region transcription start site region 155657
Tssr155658 19 25127112 to 25127125 13 + TSS region transcription start site region 155658
Tssr155659 19 25132066 to 25132098 32 + TSS region transcription start site region 155659
Tssr155660 19 25147344 to 25147357 13 + TSS region transcription start site region 155660
Tssr155661 19 25148135 to 25148140 5 + TSS region transcription start site region 155661
Tssr155662 19 25148417 to 25148434 17 + TSS region transcription start site region 155662
Tssr155663 19 25148466 to 25148482 16 + TSS region transcription start site region 155663
Gm34186 19 25153231 to 25155877 2646 - lncRNA gene predicted gene, 34186
Tssr155664 19 25155777 to 25155787 10 + TSS region transcription start site region 155664
Tssr155665 19 25155791 to 25155807 16 + TSS region transcription start site region 155665
Tssr155666 19 25155827 to 25155836 9 + TSS region transcription start site region 155666
Tlsr8 19 25158638 to 42400477 17241839 QTL thymic lymphoma suppressor region 8
D19Mit106 19 25158638 to 25158761 123 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 106
Tssr155667 19 25158645 to 25158658 13 + TSS region transcription start site region 155667
Gm24252 19 25166085 to 25166216 131 - snoRNA gene predicted gene, 24252
Tssr155668 19 25175079 to 25175090 11 + TSS region transcription start site region 155668
Tssr155669 19 25182397 to 25182410 13 + TSS region transcription start site region 155669
Cpgi10702 19 25187705 to 25187919 214 CpG island CpG island 10702
Cpgi10703 19 25236309 to 25237903 1594 CpG island CpG island 10703
Tssr155670 19 25236768 to 25236790 22 + TSS region transcription start site region 155670
Tssr155671 19 25236959 to 25236982 23 + TSS region transcription start site region 155671
Kank1 19 25236975 to 25434496 197521 + protein coding gene KN motif and ankyrin repeat domains 1
Tssr155672 19 25236990 to 25237007 17 + TSS region transcription start site region 155672
Tssr155673 19 25237242 to 25237269 27 + TSS region transcription start site region 155673
Tssr155674 19 25237470 to 25237507 37 + TSS region transcription start site region 155674
Tssr155675 19 25300570 to 25300582 12 + TSS region transcription start site region 155675
Tssr155676 19 25300586 to 25300592 6 + TSS region transcription start site region 155676
D19Mit40 19 25336321 to 25336432 111 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 40
Gm34432 19 25346409 to 25347243 834 - pseudogene predicted gene, 34432
Tssr158696 19 25347223 to 25347224 1 - TSS region transcription start site region 158696
Tssr155677 19 25377092 to 25377103 11 + TSS region transcription start site region 155677
Tssr155678 19 25382283 to 25382305 22 + TSS region transcription start site region 155678
Tssr155679 19 25383452 to 25383465 13 + TSS region transcription start site region 155679
Tssr155680 19 25383503 to 25383517 14 + TSS region transcription start site region 155680
Tssr5467 19 25383565 to 25383568 3 + TSS region transcription start site region 5467
Tssr155681 19 25383599 to 25383622 23 + TSS region transcription start site region 155681
Tssr155682 19 25395313 to 25395332 19 + TSS region transcription start site region 155682