Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:24547221-25177232

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pip5k1b 19 24294794 to 24555827 261033 - protein coding gene phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
Cpgi10696 19 24555248 to 24556744 1496 CpG island CpG island 10696
Tssr158676 19 24555804 to 24555815 11 - TSS region transcription start site region 158676
Tssr158677 19 24555819 to 24555888 69 - TSS region transcription start site region 158677
Tssr5466 19 24556144 to 24556155 11 - TSS region transcription start site region 5466
Tssr158678 19 24556190 to 24556266 76 - TSS region transcription start site region 158678
Tssr155625 19 24556326 to 24556337 11 + TSS region transcription start site region 155625
Tssr155626 19 24673998 to 24674017 19 + TSS region transcription start site region 155626
Tmem252 19 24674008 to 24679661 5653 + protein coding gene transmembrane protein 252
Tssr158679 19 24676300 to 24676309 9 - TSS region transcription start site region 158679
Tssr158680 19 24678619 to 24678642 23 - TSS region transcription start site region 158680
Tssr158681 19 24678758 to 24678771 13 - TSS region transcription start site region 158681
Pgm5 19 24683016 to 24861855 178839 - protein coding gene phosphoglucomutase 5
Gm17800 19 24692400 to 24693370 970 - pseudogene predicted gene, 17800
Gm38581 19 24706836 to 24713712 6876 + lncRNA gene predicted gene, 38581
Tssr158682 19 24749718 to 24749722 4 - TSS region transcription start site region 158682
Tssr158683 19 24859400 to 24859406 6 - TSS region transcription start site region 158683
Cpgi10697 19 24861428 to 24862218 790 CpG island CpG island 10697
Tssr158684 19 24861801 to 24861824 23 - TSS region transcription start site region 158684
Tssr158685 19 24861828 to 24861844 16 - TSS region transcription start site region 158685
Tssr158686 19 24861858 to 24861865 7 - TSS region transcription start site region 158686
Tssr158687 19 24862162 to 24862173 11 - TSS region transcription start site region 158687
Tssr158688 19 24862180 to 24862197 17 - TSS region transcription start site region 158688
Tssr158689 19 24862221 to 24862232 11 - TSS region transcription start site region 158689
Tssr158690 19 24862241 to 24862291 50 - TSS region transcription start site region 158690
Tssr155627 19 24875621 to 24875639 18 + TSS region transcription start site region 155627
Tssr155628 19 24875662 to 24875667 5 + TSS region transcription start site region 155628
Tssr155629 19 24875679 to 24875689 10 + TSS region transcription start site region 155629
Gm10053 19 24875686 to 24876634 948 + pseudogene predicted gene 10053
Cpgi10698 19 24897130 to 24897980 850 CpG island CpG island 10698
Foxd4 19 24898965 to 24901309 2344 - protein coding gene forkhead box D4
Cpgi10699 19 24899354 to 24901078 1724 CpG island CpG island 10699
Tssr155630 19 24900431 to 24900450 19 + TSS region transcription start site region 155630
Tssr158691 19 24901010 to 24901048 38 - TSS region transcription start site region 158691
Cbwd1 19 24919916 to 24961616 41700 - protein coding gene COBW domain containing 1
Mir3084-1 19 24942235 to 24942303 68 - miRNA gene microRNA 3084-1
Gm23658 19 24942236 to 24942367 131 - snoRNA gene predicted gene, 23658
Cpgi10700 19 24961414 to 24961889 475 CpG island CpG island 10700
Tssr158692 19 24961545 to 24961630 85 - TSS region transcription start site region 158692
Tssr155631 19 24997421 to 24997425 4 + TSS region transcription start site region 155631
Cpgi10701 19 24998902 to 25000072 1170 CpG island CpG island 10701
Tssr155632 19 24999500 to 24999555 55 + TSS region transcription start site region 155632
Dock8 19 24999529 to 25202432 202903 + protein coding gene dedicator of cytokinesis 8
Tssr155633 19 24999569 to 24999580 11 + TSS region transcription start site region 155633
Tssr158693 19 25002910 to 25002935 25 - TSS region transcription start site region 158693
Tssr155634 19 25004643 to 25004674 31 + TSS region transcription start site region 155634
Tssr155635 19 25027990 to 25028003 13 + TSS region transcription start site region 155635
Ndufb4b 19 25033108 to 25033578 470 + protein coding gene NADH:ubiquinone oxidoreductase subunit B4B
Tssr155636 19 25033129 to 25033136 7 + TSS region transcription start site region 155636
Tssr155637 19 25039227 to 25039231 4 + TSS region transcription start site region 155637
Tssr155638 19 25044586 to 25044598 12 + TSS region transcription start site region 155638
Tssr155639 19 25052429 to 25052448 19 + TSS region transcription start site region 155639
Tssr155640 19 25052510 to 25052519 9 + TSS region transcription start site region 155640
Tssr155641 19 25052536 to 25052541 5 + TSS region transcription start site region 155641
Tssr155642 19 25052554 to 25052611 57 + TSS region transcription start site region 155642
Tssr155643 19 25057163 to 25057172 9 + TSS region transcription start site region 155643
Tssr155644 19 25057197 to 25057223 26 + TSS region transcription start site region 155644
Tssr155645 19 25061008 to 25061053 45 + TSS region transcription start site region 155645
D19Mit97 19 25061908 to 25062032 124 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 97
Tssr155646 19 25075596 to 25075600 4 + TSS region transcription start site region 155646
Tssr155647 19 25076535 to 25076538 3 + TSS region transcription start site region 155647
Tssr155648 19 25081698 to 25081704 6 + TSS region transcription start site region 155648
Tssr155649 19 25092446 to 25092457 11 + TSS region transcription start site region 155649
Gm34235 19 25092866 to 25097404 4538 - lncRNA gene predicted gene, 34235
Tssr155650 19 25095395 to 25095410 15 + TSS region transcription start site region 155650
Tssr155651 19 25095425 to 25095434 9 + TSS region transcription start site region 155651
Tssr158694 19 25096455 to 25096470 15 - TSS region transcription start site region 158694
Tssr158695 19 25096487 to 25096503 16 - TSS region transcription start site region 158695
Tssr155652 19 25097235 to 25097246 11 + TSS region transcription start site region 155652
Tssr155653 19 25097805 to 25097815 10 + TSS region transcription start site region 155653
Tssr155654 19 25097859 to 25097908 49 + TSS region transcription start site region 155654
Tssr155655 19 25107807 to 25107809 2 + TSS region transcription start site region 155655
Tssr155656 19 25111560 to 25111563 3 + TSS region transcription start site region 155656
Tssr155657 19 25122285 to 25122291 6 + TSS region transcription start site region 155657
Tssr155658 19 25127112 to 25127125 13 + TSS region transcription start site region 155658
Tssr155659 19 25132066 to 25132098 32 + TSS region transcription start site region 155659
Tssr155660 19 25147344 to 25147357 13 + TSS region transcription start site region 155660
Tssr155661 19 25148135 to 25148140 5 + TSS region transcription start site region 155661
Tssr155662 19 25148417 to 25148434 17 + TSS region transcription start site region 155662
Tssr155663 19 25148466 to 25148482 16 + TSS region transcription start site region 155663
Gm34186 19 25153231 to 25155877 2646 - lncRNA gene predicted gene, 34186
Tssr155664 19 25155777 to 25155787 10 + TSS region transcription start site region 155664
Tssr155665 19 25155791 to 25155807 16 + TSS region transcription start site region 155665
Tssr155666 19 25155827 to 25155836 9 + TSS region transcription start site region 155666
Tlsr8 19 25158638 to 42400477 17241839 QTL thymic lymphoma suppressor region 8
D19Mit106 19 25158638 to 25158761 123 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 106
Tssr155667 19 25158645 to 25158658 13 + TSS region transcription start site region 155667
Gm24252 19 25166085 to 25166216 131 - snoRNA gene predicted gene, 24252
Tssr155668 19 25175079 to 25175090 11 + TSS region transcription start site region 155668