Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:24225819-24885888

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D19Mit107 19 24226326 to 24226443 117 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 107
Fxn 19 24261453 to 24280586 19133 - protein coding gene frataxin
Cpgi10694 19 24279854 to 24280810 956 CpG island CpG island 10694
Tssr158664 19 24280551 to 24280615 64 - TSS region transcription start site region 158664
Gm8789 19 24289000 to 24290908 1908 - pseudogene predicted gene 8789
Gm16216 19 24289716 to 24290826 1110 + pseudogene predicted gene 16216
Pip5k1b 19 24294794 to 24555827 261033 - protein coding gene phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
Gm3853 19 24298837 to 24300937 2100 unclassified gene predicted gene 3853
Tssr155615 19 24300663 to 24300673 10 + TSS region transcription start site region 155615
Tssr158665 19 24350756 to 24350758 2 - TSS region transcription start site region 158665
D19Mit117 19 24375777 to 24375885 108 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 117
Tssr155616 19 24416003 to 24416013 10 + TSS region transcription start site region 155616
Pip5k1bos 19 24416009 to 24430329 14320 + antisense lncRNA gene phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand
Tssr155617 19 24416022 to 24416031 9 + TSS region transcription start site region 155617
Tssr5465 19 24416035 to 24416042 7 + TSS region transcription start site region 5465
Fam122a 19 24476502 to 24477356 854 - protein coding gene family with sequence similarity 122, member A
Cpgi10695 19 24476539 to 24477890 1351 CpG island CpG island 10695
Tssr155618 19 24476733 to 24476752 19 + TSS region transcription start site region 155618
Tssr155619 19 24476755 to 24476766 11 + TSS region transcription start site region 155619
Tssr155620 19 24476781 to 24476792 11 + TSS region transcription start site region 155620
Tssr158666 19 24477448 to 24477490 42 - TSS region transcription start site region 158666
Tssr155621 19 24477609 to 24477627 18 + TSS region transcription start site region 155621
Tssr158667 19 24477618 to 24477627 9 - TSS region transcription start site region 158667
Tssr155622 19 24500743 to 24500749 6 + TSS region transcription start site region 155622
Tssr158668 19 24508249 to 24508258 9 - TSS region transcription start site region 158668
Tssr158669 19 24514805 to 24514812 7 - TSS region transcription start site region 158669
Tssr158670 19 24518347 to 24518361 14 - TSS region transcription start site region 158670
Tssr158671 19 24518461 to 24518506 45 - TSS region transcription start site region 158671
Tssr158672 19 24518554 to 24518602 48 - TSS region transcription start site region 158672
Tssr158673 19 24518729 to 24518754 25 - TSS region transcription start site region 158673
Tssr155623 19 24521433 to 24521440 7 + TSS region transcription start site region 155623
Tssr158674 19 24527448 to 24527452 4 - TSS region transcription start site region 158674
Tssr158675 19 24529039 to 24529062 23 - TSS region transcription start site region 158675
Tssr155624 19 24529201 to 24529206 5 + TSS region transcription start site region 155624
E860004J03Rik 19 24541197 to 24541454 257 unclassified non-coding RNA gene RIKEN cDNA E860004J03 gene
Cpgi10696 19 24555248 to 24556744 1496 CpG island CpG island 10696
Tssr158676 19 24555804 to 24555815 11 - TSS region transcription start site region 158676
Tssr158677 19 24555819 to 24555888 69 - TSS region transcription start site region 158677
Tssr5466 19 24556144 to 24556155 11 - TSS region transcription start site region 5466
Tssr158678 19 24556190 to 24556266 76 - TSS region transcription start site region 158678
Tssr155625 19 24556326 to 24556337 11 + TSS region transcription start site region 155625
Tssr155626 19 24673998 to 24674017 19 + TSS region transcription start site region 155626
Tmem252 19 24674008 to 24679661 5653 + protein coding gene transmembrane protein 252
Tssr158679 19 24676300 to 24676309 9 - TSS region transcription start site region 158679
Tssr158680 19 24678619 to 24678642 23 - TSS region transcription start site region 158680
Tssr158681 19 24678758 to 24678771 13 - TSS region transcription start site region 158681
Pgm5 19 24683016 to 24861855 178839 - protein coding gene phosphoglucomutase 5
Gm17800 19 24692400 to 24693370 970 - pseudogene predicted gene, 17800
Gm38581 19 24706836 to 24713712 6876 + lncRNA gene predicted gene, 38581
Tssr158682 19 24749718 to 24749722 4 - TSS region transcription start site region 158682
Tssr158683 19 24859400 to 24859406 6 - TSS region transcription start site region 158683
Cpgi10697 19 24861428 to 24862218 790 CpG island CpG island 10697
Tssr158684 19 24861801 to 24861824 23 - TSS region transcription start site region 158684
Tssr158685 19 24861828 to 24861844 16 - TSS region transcription start site region 158685
Tssr158686 19 24861858 to 24861865 7 - TSS region transcription start site region 158686
Tssr158687 19 24862162 to 24862173 11 - TSS region transcription start site region 158687
Tssr158688 19 24862180 to 24862197 17 - TSS region transcription start site region 158688
Tssr158689 19 24862221 to 24862232 11 - TSS region transcription start site region 158689
Tssr158690 19 24862241 to 24862291 50 - TSS region transcription start site region 158690
Tssr155627 19 24875621 to 24875639 18 + TSS region transcription start site region 155627
Tssr155628 19 24875662 to 24875667 5 + TSS region transcription start site region 155628
Tssr155629 19 24875679 to 24875689 10 + TSS region transcription start site region 155629
Gm10053 19 24875686 to 24876634 948 + pseudogene predicted gene 10053