Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:24150191-29060196

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409 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tlyr1 19 20562164 to 25336432 4774268 QTL thymic lymphoma resistance 1
Tjp2 19 24094505 to 24225030 130525 - protein coding gene tight junction protein 2
Cpgi10692 19 24173625 to 24174820 1195 CpG island CpG island 10692
Tssr158649 19 24174052 to 24174099 47 - TSS region transcription start site region 158649
Tssr158650 19 24174142 to 24174159 17 - TSS region transcription start site region 158650
Tssr158651 19 24175337 to 24175363 26 - TSS region transcription start site region 158651
Tssr158652 19 24191477 to 24191481 4 - TSS region transcription start site region 158652
Tssr155612 19 24197553 to 24197560 7 + TSS region transcription start site region 155612
Tssr155613 19 24197562 to 24197569 7 + TSS region transcription start site region 155613
Tssr5464 19 24200480 to 24200487 7 - TSS region transcription start site region 5464
Tssr158653 19 24200641 to 24200652 11 - TSS region transcription start site region 158653
Tssr158654 19 24200656 to 24200668 12 - TSS region transcription start site region 158654
Tssr158655 19 24201974 to 24201975 1 - TSS region transcription start site region 158655
Tssr155614 19 24224037 to 24224052 15 + TSS region transcription start site region 155614
Cpgi10693 19 24224373 to 24225356 983 CpG island CpG island 10693
Tssr158656 19 24224892 to 24224909 17 - TSS region transcription start site region 158656
Tssr158657 19 24224924 to 24224946 22 - TSS region transcription start site region 158657
Tssr158658 19 24224948 to 24224966 18 - TSS region transcription start site region 158658
Tssr158659 19 24224980 to 24224994 14 - TSS region transcription start site region 158659
Tssr158660 19 24225015 to 24225033 18 - TSS region transcription start site region 158660
Tssr158661 19 24225043 to 24225051 8 - TSS region transcription start site region 158661
Tssr158662 19 24225063 to 24225074 11 - TSS region transcription start site region 158662
Tssr158663 19 24225080 to 24225116 36 - TSS region transcription start site region 158663
D19Mit107 19 24226326 to 24226443 117 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 107
Fxn 19 24261453 to 24280586 19133 - protein coding gene frataxin
Cpgi10694 19 24279854 to 24280810 956 CpG island CpG island 10694
Tssr158664 19 24280551 to 24280615 64 - TSS region transcription start site region 158664
Gm8789 19 24289000 to 24290908 1908 - pseudogene predicted gene 8789
Gm16216 19 24289716 to 24290826 1110 + pseudogene predicted gene 16216
Pip5k1b 19 24294794 to 24555827 261033 - protein coding gene phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
Gm3853 19 24298837 to 24300937 2100 unclassified gene predicted gene 3853
Tssr155615 19 24300663 to 24300673 10 + TSS region transcription start site region 155615
Tssr158665 19 24350756 to 24350758 2 - TSS region transcription start site region 158665
D19Mit117 19 24375777 to 24375885 108 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 117
Tssr155616 19 24416003 to 24416013 10 + TSS region transcription start site region 155616
Pip5k1bos 19 24416009 to 24430329 14320 + antisense lncRNA gene phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand
Tssr155617 19 24416022 to 24416031 9 + TSS region transcription start site region 155617
Tssr5465 19 24416035 to 24416042 7 + TSS region transcription start site region 5465
Fam122a 19 24476502 to 24477356 854 - protein coding gene family with sequence similarity 122, member A
Cpgi10695 19 24476539 to 24477890 1351 CpG island CpG island 10695
Tssr155618 19 24476733 to 24476752 19 + TSS region transcription start site region 155618
Tssr155619 19 24476755 to 24476766 11 + TSS region transcription start site region 155619
Tssr155620 19 24476781 to 24476792 11 + TSS region transcription start site region 155620
Tssr158666 19 24477448 to 24477490 42 - TSS region transcription start site region 158666
Tssr155621 19 24477609 to 24477627 18 + TSS region transcription start site region 155621
Tssr158667 19 24477618 to 24477627 9 - TSS region transcription start site region 158667
Tssr155622 19 24500743 to 24500749 6 + TSS region transcription start site region 155622
Tssr158668 19 24508249 to 24508258 9 - TSS region transcription start site region 158668
Tssr158669 19 24514805 to 24514812 7 - TSS region transcription start site region 158669
Tssr158670 19 24518347 to 24518361 14 - TSS region transcription start site region 158670
Tssr158671 19 24518461 to 24518506 45 - TSS region transcription start site region 158671
Tssr158672 19 24518554 to 24518602 48 - TSS region transcription start site region 158672
Tssr158673 19 24518729 to 24518754 25 - TSS region transcription start site region 158673
Tssr155623 19 24521433 to 24521440 7 + TSS region transcription start site region 155623
Tssr158674 19 24527448 to 24527452 4 - TSS region transcription start site region 158674
Tssr158675 19 24529039 to 24529062 23 - TSS region transcription start site region 158675
Tssr155624 19 24529201 to 24529206 5 + TSS region transcription start site region 155624
E860004J03Rik 19 24541197 to 24541454 257 unclassified non-coding RNA gene RIKEN cDNA E860004J03 gene
Cpgi10696 19 24555248 to 24556744 1496 CpG island CpG island 10696
Tssr158676 19 24555804 to 24555815 11 - TSS region transcription start site region 158676
Tssr158677 19 24555819 to 24555888 69 - TSS region transcription start site region 158677
Tssr5466 19 24556144 to 24556155 11 - TSS region transcription start site region 5466
Tssr158678 19 24556190 to 24556266 76 - TSS region transcription start site region 158678
Tssr155625 19 24556326 to 24556337 11 + TSS region transcription start site region 155625
Tssr155626 19 24673998 to 24674017 19 + TSS region transcription start site region 155626
Tmem252 19 24674008 to 24679661 5653 + protein coding gene transmembrane protein 252
Tssr158679 19 24676300 to 24676309 9 - TSS region transcription start site region 158679
Tssr158680 19 24678619 to 24678642 23 - TSS region transcription start site region 158680
Tssr158681 19 24678758 to 24678771 13 - TSS region transcription start site region 158681
Pgm5 19 24683016 to 24861855 178839 - protein coding gene phosphoglucomutase 5
Gm17800 19 24692400 to 24693370 970 - pseudogene predicted gene, 17800
Gm38581 19 24706836 to 24713712 6876 + lncRNA gene predicted gene, 38581
Tssr158682 19 24749718 to 24749722 4 - TSS region transcription start site region 158682
Tssr158683 19 24859400 to 24859406 6 - TSS region transcription start site region 158683
Cpgi10697 19 24861428 to 24862218 790 CpG island CpG island 10697
Tssr158684 19 24861801 to 24861824 23 - TSS region transcription start site region 158684
Tssr158685 19 24861828 to 24861844 16 - TSS region transcription start site region 158685
Tssr158686 19 24861858 to 24861865 7 - TSS region transcription start site region 158686
Tssr158687 19 24862162 to 24862173 11 - TSS region transcription start site region 158687
Tssr158688 19 24862180 to 24862197 17 - TSS region transcription start site region 158688
Tssr158689 19 24862221 to 24862232 11 - TSS region transcription start site region 158689
Tssr158690 19 24862241 to 24862291 50 - TSS region transcription start site region 158690
Tssr155627 19 24875621 to 24875639 18 + TSS region transcription start site region 155627
Tssr155628 19 24875662 to 24875667 5 + TSS region transcription start site region 155628
Tssr155629 19 24875679 to 24875689 10 + TSS region transcription start site region 155629
Gm10053 19 24875686 to 24876634 948 + pseudogene predicted gene 10053
Cpgi10698 19 24897130 to 24897980 850 CpG island CpG island 10698
Foxd4 19 24898965 to 24901309 2344 - protein coding gene forkhead box D4
Cpgi10699 19 24899354 to 24901078 1724 CpG island CpG island 10699
Tssr155630 19 24900431 to 24900450 19 + TSS region transcription start site region 155630
Tssr158691 19 24901010 to 24901048 38 - TSS region transcription start site region 158691
Cbwd1 19 24919916 to 24961616 41700 - protein coding gene COBW domain containing 1
Mir3084-1 19 24942235 to 24942303 68 - miRNA gene microRNA 3084-1
Gm23658 19 24942236 to 24942367 131 - snoRNA gene predicted gene, 23658
Cpgi10700 19 24961414 to 24961889 475 CpG island CpG island 10700
Tssr158692 19 24961545 to 24961630 85 - TSS region transcription start site region 158692
Tssr155631 19 24997421 to 24997425 4 + TSS region transcription start site region 155631
Cpgi10701 19 24998902 to 25000072 1170 CpG island CpG island 10701
Tssr155632 19 24999500 to 24999555 55 + TSS region transcription start site region 155632
Dock8 19 24999529 to 25202432 202903 + protein coding gene dedicator of cytokinesis 8
Tssr155633 19 24999569 to 24999580 11 + TSS region transcription start site region 155633
Tssr158693 19 25002910 to 25002935 25 - TSS region transcription start site region 158693
Tssr155634 19 25004643 to 25004674 31 + TSS region transcription start site region 155634
Tssr155635 19 25027990 to 25028003 13 + TSS region transcription start site region 155635
Ndufb4b 19 25033108 to 25033578 470 + protein coding gene NADH:ubiquinone oxidoreductase subunit B4B
Tssr155636 19 25033129 to 25033136 7 + TSS region transcription start site region 155636
Tssr155637 19 25039227 to 25039231 4 + TSS region transcription start site region 155637
Tssr155638 19 25044586 to 25044598 12 + TSS region transcription start site region 155638
Tssr155639 19 25052429 to 25052448 19 + TSS region transcription start site region 155639
Tssr155640 19 25052510 to 25052519 9 + TSS region transcription start site region 155640
Tssr155641 19 25052536 to 25052541 5 + TSS region transcription start site region 155641
Tssr155642 19 25052554 to 25052611 57 + TSS region transcription start site region 155642
Tssr155643 19 25057163 to 25057172 9 + TSS region transcription start site region 155643
Tssr155644 19 25057197 to 25057223 26 + TSS region transcription start site region 155644
Tssr155645 19 25061008 to 25061053 45 + TSS region transcription start site region 155645
D19Mit97 19 25061908 to 25062032 124 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 97
Tssr155646 19 25075596 to 25075600 4 + TSS region transcription start site region 155646
Tssr155647 19 25076535 to 25076538 3 + TSS region transcription start site region 155647
Tssr155648 19 25081698 to 25081704 6 + TSS region transcription start site region 155648
Tssr155649 19 25092446 to 25092457 11 + TSS region transcription start site region 155649
Gm34235 19 25092866 to 25097404 4538 - lncRNA gene predicted gene, 34235
Tssr155650 19 25095395 to 25095410 15 + TSS region transcription start site region 155650
Tssr155651 19 25095425 to 25095434 9 + TSS region transcription start site region 155651
Tssr158694 19 25096455 to 25096470 15 - TSS region transcription start site region 158694
Tssr158695 19 25096487 to 25096503 16 - TSS region transcription start site region 158695
Tssr155652 19 25097235 to 25097246 11 + TSS region transcription start site region 155652
Tssr155653 19 25097805 to 25097815 10 + TSS region transcription start site region 155653
Tssr155654 19 25097859 to 25097908 49 + TSS region transcription start site region 155654
Tssr155655 19 25107807 to 25107809 2 + TSS region transcription start site region 155655
Tssr155656 19 25111560 to 25111563 3 + TSS region transcription start site region 155656
Tssr155657 19 25122285 to 25122291 6 + TSS region transcription start site region 155657
Tssr155658 19 25127112 to 25127125 13 + TSS region transcription start site region 155658
Tssr155659 19 25132066 to 25132098 32 + TSS region transcription start site region 155659
Tssr155660 19 25147344 to 25147357 13 + TSS region transcription start site region 155660
Tssr155661 19 25148135 to 25148140 5 + TSS region transcription start site region 155661
Tssr155662 19 25148417 to 25148434 17 + TSS region transcription start site region 155662
Tssr155663 19 25148466 to 25148482 16 + TSS region transcription start site region 155663
Gm34186 19 25153231 to 25155877 2646 - lncRNA gene predicted gene, 34186
Tssr155664 19 25155777 to 25155787 10 + TSS region transcription start site region 155664
Tssr155665 19 25155791 to 25155807 16 + TSS region transcription start site region 155665
Tssr155666 19 25155827 to 25155836 9 + TSS region transcription start site region 155666
D19Mit106 19 25158638 to 25158761 123 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 106
Tlsr8 19 25158638 to 42400477 17241839 QTL thymic lymphoma suppressor region 8
Tssr155667 19 25158645 to 25158658 13 + TSS region transcription start site region 155667
Gm24252 19 25166085 to 25166216 131 - snoRNA gene predicted gene, 24252
Tssr155668 19 25175079 to 25175090 11 + TSS region transcription start site region 155668
Tssr155669 19 25182397 to 25182410 13 + TSS region transcription start site region 155669
Cpgi10702 19 25187705 to 25187919 214 CpG island CpG island 10702
Cpgi10703 19 25236309 to 25237903 1594 CpG island CpG island 10703
Tssr155670 19 25236768 to 25236790 22 + TSS region transcription start site region 155670
Tssr155671 19 25236959 to 25236982 23 + TSS region transcription start site region 155671
Kank1 19 25236975 to 25434496 197521 + protein coding gene KN motif and ankyrin repeat domains 1
Tssr155672 19 25236990 to 25237007 17 + TSS region transcription start site region 155672
Tssr155673 19 25237242 to 25237269 27 + TSS region transcription start site region 155673
Tssr155674 19 25237470 to 25237507 37 + TSS region transcription start site region 155674
Tssr155675 19 25300570 to 25300582 12 + TSS region transcription start site region 155675
Tssr155676 19 25300586 to 25300592 6 + TSS region transcription start site region 155676
D19Mit40 19 25336321 to 25336432 111 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 40
Gm34432 19 25346409 to 25347243 834 - pseudogene predicted gene, 34432
Tssr158696 19 25347223 to 25347224 1 - TSS region transcription start site region 158696
Tssr155677 19 25377092 to 25377103 11 + TSS region transcription start site region 155677
Tssr155678 19 25382283 to 25382305 22 + TSS region transcription start site region 155678
Tssr155679 19 25383452 to 25383465 13 + TSS region transcription start site region 155679
Tssr155680 19 25383503 to 25383517 14 + TSS region transcription start site region 155680
Tssr5467 19 25383565 to 25383568 3 + TSS region transcription start site region 5467
Tssr155681 19 25383599 to 25383622 23 + TSS region transcription start site region 155681
Tssr155682 19 25395313 to 25395332 19 + TSS region transcription start site region 155682
Tssr155683 19 25406661 to 25406692 31 + TSS region transcription start site region 155683
Tssr155684 19 25406765 to 25406778 13 + TSS region transcription start site region 155684
Cpgi10704 19 25406778 to 25407114 336 CpG island CpG island 10704
Tssr155685 19 25406936 to 25407002 66 + TSS region transcription start site region 155685
Tssr155686 19 25407017 to 25407028 11 + TSS region transcription start site region 155686
Tssr5468 19 25407046 to 25407073 27 + TSS region transcription start site region 5468
Tssr155687 19 25407077 to 25407088 11 + TSS region transcription start site region 155687
Tssr155688 19 25407094 to 25407108 14 + TSS region transcription start site region 155688
Cpgi10705 19 25410089 to 25410275 186 CpG island CpG island 10705
Tssr155689 19 25423902 to 25423905 3 + TSS region transcription start site region 155689
Gm26207 19 25453960 to 25454063 103 - snRNA gene predicted gene, 26207
Cpgi10706 19 25493763 to 25494177 414 CpG island CpG island 10706
Gm5249 19 25493833 to 25496716 2883 + pseudogene predicted gene 5249
Cpgi10707 19 25505232 to 25507026 1794 CpG island CpG island 10707
Dmrt1 19 25505618 to 25604328 98710 + protein coding gene doublesex and mab-3 related transcription factor 1
Tssr155690 19 25505620 to 25505673 53 + TSS region transcription start site region 155690
Tssr155691 19 25505736 to 25505771 35 + TSS region transcription start site region 155691
Tssr155692 19 25505775 to 25505780 5 + TSS region transcription start site region 155692
Tssr155693 19 25505782 to 25505815 33 + TSS region transcription start site region 155693
Tssr155694 19 25505833 to 25505845 12 + TSS region transcription start site region 155694
Tssr155695 19 25505863 to 25505874 11 + TSS region transcription start site region 155695
Tssr155696 19 25552072 to 25552118 46 + TSS region transcription start site region 155696
Tssr155697 19 25599495 to 25599496 1 + TSS region transcription start site region 155697
Tssr155698 19 25603190 to 25603195 5 + TSS region transcription start site region 155698
Cpgi10708 19 25604663 to 25605145 482 CpG island CpG island 10708
Cpgi10709 19 25605631 to 25606457 826 CpG island CpG island 10709
Cpgi10710 19 25607581 to 25607767 186 CpG island CpG island 10710
Cpgi10711 19 25609068 to 25609460 392 CpG island CpG island 10711
Cpgi10712 19 25609959 to 25611706 1747 CpG island CpG island 10712
Tssr155699 19 25610256 to 25610261 5 + TSS region transcription start site region 155699
Tssr155700 19 25610533 to 25610553 20 + TSS region transcription start site region 155700
Dmrt3 19 25610537 to 25623920 13383 + protein coding gene doublesex and mab-3 related transcription factor 3
Tssr155701 19 25610564 to 25610576 12 + TSS region transcription start site region 155701