Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:23827751-24176019

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Apba1 19 23758876 to 23949597 190721 + protein coding gene amyloid beta (A4) precursor protein binding, family A, member 1
Tssr155603 19 23845606 to 23845609 3 + TSS region transcription start site region 155603
Tssr155604 19 23857185 to 23857190 5 + TSS region transcription start site region 155604
B230104F01Rik 19 23870739 to 23871825 1086 unclassified gene RIKEN cDNA B230104F01 gene
Cpgi10688 19 23892646 to 23894100 1454 CpG island CpG island 10688
Tssr155605 19 23893485 to 23893502 17 + TSS region transcription start site region 155605
Tssr155606 19 23893506 to 23893536 30 + TSS region transcription start site region 155606
Tssr155607 19 23893541 to 23893553 12 + TSS region transcription start site region 155607
Tssr155608 19 23893589 to 23893609 20 + TSS region transcription start site region 155608
Tssr155609 19 23904577 to 23904583 6 + TSS region transcription start site region 155609
Tssr155610 19 23904589 to 23904632 43 + TSS region transcription start site region 155610
Gm34076 19 23905122 to 23917546 12424 - lncRNA gene predicted gene, 34076
D19Dcr22 19 23934240 to 23934335 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 22
D19Dcr23 19 23956384 to 23956479 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 23
Fam189a2 19 23972751 to 24031019 58268 - protein coding gene family with sequence similarity 189, member A2
Cpgi10689 19 24004652 to 24004808 156 CpG island CpG island 10689
Tssr158640 19 24007334 to 24007354 20 - TSS region transcription start site region 158640
D19Mit73 19 24019333 to 24019482 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 73
Cpgi10690 19 24030271 to 24031550 1279 CpG island CpG island 10690
Tssr155611 19 24030818 to 24030822 4 + TSS region transcription start site region 155611
Tssr158641 19 24030917 to 24030995 78 - TSS region transcription start site region 158641
Tssr158642 19 24031006 to 24031028 22 - TSS region transcription start site region 158642
Tssr158643 19 24031238 to 24031251 13 - TSS region transcription start site region 158643
Tssr158644 19 24042547 to 24042567 20 - TSS region transcription start site region 158644
Gm41823 19 24044383 to 24047157 2774 - lncRNA gene predicted gene, 41823
D19Dcr24 19 24053133 to 24053238 105 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 24
1700021P04Rik 19 24064793 to 24066452 1659 + lincRNA gene RIKEN cDNA 1700021P04 gene
Gm41824 19 24080931 to 24090765 9834 + lncRNA gene predicted gene, 41824
Tjp2 19 24094505 to 24225030 130525 - protein coding gene tight junction protein 2
Tssr158645 19 24125809 to 24125846 37 - TSS region transcription start site region 158645
Cpgi10691 19 24130976 to 24131285 309 CpG island CpG island 10691
Tssr158646 19 24142875 to 24142886 11 - TSS region transcription start site region 158646
Tssr158647 19 24142907 to 24142914 7 - TSS region transcription start site region 158647
Tssr158648 19 24147035 to 24147076 41 - TSS region transcription start site region 158648
Cpgi10692 19 24173625 to 24174820 1195 CpG island CpG island 10692
Tssr158649 19 24174052 to 24174099 47 - TSS region transcription start site region 158649
Tssr158650 19 24174142 to 24174159 17 - TSS region transcription start site region 158650
Tssr158651 19 24175337 to 24175363 26 - TSS region transcription start site region 158651