Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:23142609-23608322

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10683 19 23140654 to 23142639 1985 CpG island CpG island 10683
Klf9 19 23141226 to 23166911 25685 + protein coding gene Kruppel-like factor 9
Mir1192 19 23149431 to 23149551 120 + miRNA gene microRNA 1192
Tssr155589 19 23165227 to 23165240 13 + TSS region transcription start site region 155589
D19Ertd79e 19 23176118 to 23176367 249 DNA segment DNA segment, Chr 19, ERATO Doi 79, expressed
Smc5 19 23206451 to 23273897 67446 - protein coding gene structural maintenance of chromosomes 5
Tssr158625 19 23207526 to 23207550 24 - TSS region transcription start site region 158625
D19Ertd756e 19 23216829 to 23217058 229 DNA segment DNA segment, Chr 19, ERATO Doi 756, expressed
Tssr158626 19 23246640 to 23246655 15 - TSS region transcription start site region 158626
Cpgi10684 19 23273224 to 23274310 1086 CpG island CpG island 10684
Tssr158627 19 23273789 to 23273796 7 - TSS region transcription start site region 158627
Tssr158628 19 23273815 to 23273861 46 - TSS region transcription start site region 158628
Tssr158629 19 23273864 to 23273884 20 - TSS region transcription start site region 158629
Tssr158630 19 23273893 to 23273918 25 - TSS region transcription start site region 158630
Gm33950 19 23273925 to 23274359 434 + lncRNA gene predicted gene, 33950
Gm24263 19 23296329 to 23296435 106 + snRNA gene predicted gene, 24263
Gm41821 19 23299930 to 23309919 9989 + lncRNA gene predicted gene, 41821
Mamdc2 19 23302609 to 23448322 145713 - protein coding gene MAM domain containing 2
D19Mit80 19 23313374 to 23313498 124 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 80
Tssr158631 19 23357562 to 23357588 26 - TSS region transcription start site region 158631
Cpgi10685 19 23448035 to 23448360 325 CpG island CpG island 10685
Tssr158632 19 23448190 to 23448201 11 - TSS region transcription start site region 158632
Tssr158633 19 23448249 to 23448279 30 - TSS region transcription start site region 158633
Tssr158634 19 23448289 to 23448300 11 - TSS region transcription start site region 158634
Tssr158635 19 23448332 to 23448350 18 - TSS region transcription start site region 158635
Tssr158636 19 23448356 to 23448378 22 - TSS region transcription start site region 158636
Tssr158637 19 23448393 to 23448406 13 - TSS region transcription start site region 158637
Tssr158638 19 23448411 to 23448425 14 - TSS region transcription start site region 158638
Gm34012 19 23496764 to 23523052 26288 + lncRNA gene predicted gene, 34012
1700028P14Rik 19 23558760 to 23652812 94052 - protein coding gene RIKEN cDNA 1700028P14 gene
Tssr155590 19 23605837 to 23605843 6 + TSS region transcription start site region 155590