Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:21684028-22594055

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abhd17b 19 21653309 to 21685637 32328 + protein coding gene abhydrolase domain containing 17B
C130076G22Rik 19 21689291 to 21691116 1825 unclassified gene RIKEN cDNA C130076G22 gene
Gm41818 19 21713818 to 21732331 18513 + lncRNA gene predicted gene, 41818
Tssr155512 19 21713840 to 21713861 21 + TSS region transcription start site region 155512
Tssr158598 19 21737654 to 21737662 8 - TSS region transcription start site region 158598
Cpgi10677 19 21742099 to 21742476 377 CpG island CpG island 10677
Tssr155513 19 21777525 to 21777530 5 + TSS region transcription start site region 155513
Cpgi10678 19 21777953 to 21779164 1211 CpG island CpG island 10678
Tssr5460 19 21778297 to 21778300 3 + TSS region transcription start site region 5460
Tssr155514 19 21778307 to 21778318 11 + TSS region transcription start site region 155514
Tssr155515 19 21778325 to 21778363 38 + TSS region transcription start site region 155515
Cemip2 19 21778342 to 21858327 79985 + protein coding gene cell migration inducing hyaluronidase 2
Tssr155516 19 21778365 to 21778374 9 + TSS region transcription start site region 155516
Tssr155517 19 21778376 to 21778392 16 + TSS region transcription start site region 155517
Tssr155518 19 21778642 to 21778651 9 + TSS region transcription start site region 155518
Tssr155519 19 21784802 to 21784809 7 + TSS region transcription start site region 155519
Cpgi10679 19 21792710 to 21792945 235 CpG island CpG island 10679
Tssr155520 19 21792777 to 21792799 22 + TSS region transcription start site region 155520
Tssr155521 19 21792816 to 21792841 25 + TSS region transcription start site region 155521
Tssr155522 19 21793252 to 21793256 4 + TSS region transcription start site region 155522
Gm18951 19 21837571 to 21838711 1140 + pseudogene predicted gene, 18951
Tssr155523 19 21839959 to 21839964 5 + TSS region transcription start site region 155523
Tssr155524 19 21840255 to 21840260 5 + TSS region transcription start site region 155524
D19Mit96 19 21841593 to 21841711 118 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 96
Tssr155525 19 21851417 to 21851430 13 + TSS region transcription start site region 155525
Tssr155526 19 21858075 to 21858081 6 + TSS region transcription start site region 155526
Pstc7 19 21871073 to 21871073 0 QTL periosteal circumference 7
Tssr155527 19 21937297 to 21937312 15 + TSS region transcription start site region 155527
Gm5514 19 21938079 to 21938384 305 + pseudogene predicted gene 5514
Tssr158599 19 21942394 to 21942399 5 - TSS region transcription start site region 158599
Tssr158600 19 21942419 to 21942428 9 - TSS region transcription start site region 158600
Tssr155528 19 21992573 to 21992596 23 + TSS region transcription start site region 155528
Tgct3 19 22006727 to 32935319 10928592 QTL testicular germ cell tumor 3
D19Mit111 19 22006727 to 22006851 124 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 111
Tssr155529 19 22040852 to 22040883 31 + TSS region transcription start site region 155529
Cpgi10680 19 22138831 to 22139381 550 CpG island CpG island 10680
Tssr155530 19 22139028 to 22139055 27 + TSS region transcription start site region 155530
Trpm3 19 22139119 to 22989884 850765 + protein coding gene transient receptor potential cation channel, subfamily M, member 3
Gm22506 19 22235521 to 22235618 97 - snoRNA gene predicted gene, 22506
Gm33755 19 22254745 to 22262751 8006 + pseudogene predicted gene, 33755
Tssr155531 19 22321643 to 22321647 4 + TSS region transcription start site region 155531
Edvq4 19 22328154 to 22328154 0 QTL endothelium dependent vasorelaxation QTL 4
D19Mit45 19 22335962 to 22336106 144 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 45
W3q14 19 22335962 to 53923073 31587111 QTL weight 3 weeks QTL 14
Tbbr4 19 22335962 to 22336106 144 QTL Trypanosoma brucei brucei response 4
Tssr158601 19 22340715 to 22340719 4 - TSS region transcription start site region 158601
D19Mit130 19 22390672 to 22390783 111 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 130
Gm27151 19 22438520 to 22448865 10345 - antisense lncRNA gene predicted gene 27151
Nsa2-ps1 19 22441007 to 22443653 2646 + pseudogene NSA2 ribosome biogenesis homolog, pseudogene 1
Tssr155532 19 22441013 to 22441031 18 + TSS region transcription start site region 155532
Tssr155533 19 22447896 to 22447908 12 + TSS region transcription start site region 155533
Tssr155534 19 22448007 to 22448040 33 + TSS region transcription start site region 155534
Tssr155535 19 22448052 to 22448061 9 + TSS region transcription start site region 155535
Tssr155536 19 22448074 to 22448088 14 + TSS region transcription start site region 155536
Tssr155537 19 22448119 to 22448145 26 + TSS region transcription start site region 155537
Tssr155538 19 22448178 to 22448196 18 + TSS region transcription start site region 155538
Tssr155539 19 22448202 to 22448223 21 + TSS region transcription start site region 155539
Tssr155540 19 22448242 to 22448247 5 + TSS region transcription start site region 155540
Tssr5461 19 22448545 to 22448584 39 - TSS region transcription start site region 5461
Gm33649 19 22509995 to 22517465 7470 + lncRNA gene predicted gene, 33649
Tssr155541 19 22514487 to 22514497 10 + TSS region transcription start site region 155541
9630005C17Rik 19 22552661 to 22555197 2536 unclassified gene RIKEN cDNA 9630005C17 gene