Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:20635949-21705956

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aldh1a1 19 20601982 to 20643462 41480 + protein coding gene aldehyde dehydrogenase family 1, subfamily A1
Tssr155482 19 20640054 to 20640086 32 + TSS region transcription start site region 155482
C730037M02Rik 19 20689466 to 20690526 1060 unclassified gene RIKEN cDNA C730037M02 gene
Aldh1a7 19 20692953 to 20727556 34603 - protein coding gene aldehyde dehydrogenase family 1, subfamily A7
Tssr158562 19 20727533 to 20727568 35 - TSS region transcription start site region 158562
Tmc1 19 20783458 to 20954202 170744 - protein coding gene transmembrane channel-like gene family 1
Tssr155483 19 20919149 to 20919175 26 + TSS region transcription start site region 155483
Gm32750 19 20941769 to 20954762 12993 + lncRNA gene predicted gene, 32750
Tssr158563 19 20954249 to 20954295 46 - TSS region transcription start site region 158563
Gm41817 19 20956541 to 20961920 5379 + lncRNA gene predicted gene, 41817
Tssr158564 19 20964401 to 20964408 7 - TSS region transcription start site region 158564
Tssr5458 19 20967809 to 20967829 20 + TSS region transcription start site region 5458
Tssr158565 19 21053677 to 21053713 36 - TSS region transcription start site region 158565
Tssr158566 19 21077874 to 21077880 6 - TSS region transcription start site region 158566
4930554I06Rik 19 21104710 to 21105538 828 + lncRNA gene RIKEN cDNA 4930554I06 gene
Gm3775 19 21121191 to 21125705 4514 - lncRNA gene predicted gene 3775
Gm32979 19 21138695 to 21146597 7902 + lncRNA gene predicted gene, 32979
Gm45918 19 21165087 to 21210686 45599 - lncRNA gene predicted gene, 45918
Tssr158567 19 21170864 to 21170869 5 - TSS region transcription start site region 158567
Tssr158568 19 21170925 to 21170939 14 - TSS region transcription start site region 158568
Tssr158569 19 21170949 to 21170956 7 - TSS region transcription start site region 158569
Tssr158570 19 21170964 to 21170994 30 - TSS region transcription start site region 158570
Tssr158571 19 21172488 to 21172514 26 - TSS region transcription start site region 158571
Tssr158572 19 21174851 to 21174860 9 - TSS region transcription start site region 158572
Tssr158573 19 21174872 to 21174883 11 - TSS region transcription start site region 158573
Tssr158574 19 21174884 to 21174905 21 - TSS region transcription start site region 158574
Cpgi10674 19 21271612 to 21273171 1559 CpG island CpG island 10674
Tssr155484 19 21271828 to 21271848 20 + TSS region transcription start site region 155484
Tssr155485 19 21271850 to 21271890 40 + TSS region transcription start site region 155485
Tssr155486 19 21272257 to 21272263 6 + TSS region transcription start site region 155486
Tssr155487 19 21272276 to 21272296 20 + TSS region transcription start site region 155487
Zfand5 19 21272278 to 21282289 10011 + protein coding gene zinc finger, AN1-type domain 5
Tssr155488 19 21272516 to 21272542 26 + TSS region transcription start site region 155488
Tssr155489 19 21274436 to 21274453 17 + TSS region transcription start site region 155489
Tssr155490 19 21275050 to 21275079 29 + TSS region transcription start site region 155490
Tssr155491 19 21276438 to 21276457 19 + TSS region transcription start site region 155491
Tssr155492 19 21276459 to 21276476 17 + TSS region transcription start site region 155492
Tssr155493 19 21277700 to 21277723 23 + TSS region transcription start site region 155493
Tssr155494 19 21278172 to 21278174 2 + TSS region transcription start site region 155494
1500002I01Rik 19 21293945 to 21295009 1064 unclassified gene RIKEN cDNA 1500002I01 gene
D19Mit14 19 21333416 to 21333564 148 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 14
Tssr155495 19 21377295 to 21377305 10 + TSS region transcription start site region 155495
Tssr158575 19 21383896 to 21383907 11 - TSS region transcription start site region 158575
Tssr158576 19 21384042 to 21384051 9 - TSS region transcription start site region 158576
Gda 19 21391307 to 21472661 81354 - protein coding gene guanine deaminase
Tssr155496 19 21396609 to 21396616 7 + TSS region transcription start site region 155496
Tssr155497 19 21396636 to 21396657 21 + TSS region transcription start site region 155497
Tssr155498 19 21419321 to 21419325 4 + TSS region transcription start site region 155498
Tssr158577 19 21440852 to 21440872 20 - TSS region transcription start site region 158577
Tssr158578 19 21440889 to 21440902 13 - TSS region transcription start site region 158578
Tssr158579 19 21446361 to 21446366 5 - TSS region transcription start site region 158579
Tssr158580 19 21457500 to 21457501 1 - TSS region transcription start site region 158580
Tssr158581 19 21460882 to 21460884 2 - TSS region transcription start site region 158581
Tssr158582 19 21461300 to 21461309 9 - TSS region transcription start site region 158582
Tssr5459 19 21461317 to 21461329 12 - TSS region transcription start site region 5459
Tssr158583 19 21465189 to 21465191 2 - TSS region transcription start site region 158583
Tssr158584 19 21471138 to 21471149 11 - TSS region transcription start site region 158584
Tssr158585 19 21471160 to 21471174 14 - TSS region transcription start site region 158585
Tssr158586 19 21471188 to 21471205 17 - TSS region transcription start site region 158586
Tssr158587 19 21471280 to 21471282 2 - TSS region transcription start site region 158587
Tssr155499 19 21471334 to 21471348 14 + TSS region transcription start site region 155499
Cpgi10675 19 21472098 to 21472738 640 CpG island CpG island 10675
Tssr158588 19 21472512 to 21472533 21 - TSS region transcription start site region 158588
Tssr158589 19 21472552 to 21472606 54 - TSS region transcription start site region 158589
2010105D22Rik 19 21487931 to 21488151 220 unclassified gene RIKEN cDNA 2010105D22 gene
Gm3443 19 21555674 to 21557657 1983 + protein coding gene predicted gene 3443
Gm38486 19 21577760 to 21596179 18419 - lncRNA gene predicted gene, 38486
1110059E24Rik 19 21597313 to 21652791 55478 - protein coding gene RIKEN cDNA 1110059E24 gene
9030607L02Rik 19 21601220 to 21602899 1679 unclassified gene RIKEN cDNA 9030607L02 gene
Tssr158590 19 21630734 to 21630741 7 - TSS region transcription start site region 158590
Tssr158591 19 21630762 to 21630783 21 - TSS region transcription start site region 158591
Tssr158592 19 21630784 to 21630803 19 - TSS region transcription start site region 158592
Cpgi10676 19 21652168 to 21653948 1780 CpG island CpG island 10676
Tssr158593 19 21652714 to 21652723 9 - TSS region transcription start site region 158593
Tssr158594 19 21652745 to 21652769 24 - TSS region transcription start site region 158594
Tssr158595 19 21652779 to 21652819 40 - TSS region transcription start site region 158595
Tssr155500 19 21652850 to 21652902 52 + TSS region transcription start site region 155500
Tssr155501 19 21653104 to 21653109 5 + TSS region transcription start site region 155501
Tssr155502 19 21653113 to 21653124 11 + TSS region transcription start site region 155502
Tssr155503 19 21653176 to 21653192 16 + TSS region transcription start site region 155503
Tssr155504 19 21653197 to 21653213 16 + TSS region transcription start site region 155504
Tssr155505 19 21653276 to 21653301 25 + TSS region transcription start site region 155505
Tssr155506 19 21653302 to 21653320 18 + TSS region transcription start site region 155506
Abhd17b 19 21653309 to 21685637 32328 + protein coding gene abhydrolase domain containing 17B
Tssr155507 19 21653323 to 21653345 22 + TSS region transcription start site region 155507
Tssr155508 19 21653428 to 21653445 17 + TSS region transcription start site region 155508
Tssr155509 19 21653482 to 21653507 25 + TSS region transcription start site region 155509
Tssr155510 19 21653522 to 21653536 14 + TSS region transcription start site region 155510
Tssr155511 19 21653555 to 21653566 11 + TSS region transcription start site region 155511
5033423O07Rik 19 21657795 to 21661572 3777 unclassified gene RIKEN cDNA 5033423O07 gene
B230378D16Rik 19 21663157 to 21666017 2860 unclassified gene RIKEN cDNA B230378D16 gene
Tssr158596 19 21674871 to 21674880 9 - TSS region transcription start site region 158596
Tssr158597 19 21674887 to 21674909 22 - TSS region transcription start site region 158597
C130076G22Rik 19 21689291 to 21691116 1825 unclassified gene RIKEN cDNA C130076G22 gene