Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:20543458-21194202

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E030003E18Rik 19 20492715 to 20556410 63695 + lncRNA gene RIKEN cDNA E030003E18 gene
C730002L08Rik 19 20534527 to 20552330 17803 - antisense lncRNA gene RIKEN cDNA C730002L08 gene
D19Mit60 19 20562164 to 20562299 135 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 60
Tlyr1 19 20562164 to 25336432 4774268 QTL thymic lymphoma resistance 1
Tgct2 19 20562299 to 3278551 -17283748 QTL testicular germ cell tumor 2
2900002J02Rik 19 20583523 to 20585066 1543 unclassified gene RIKEN cDNA 2900002J02 gene
Gm6684 19 20586073 to 20586757 684 - pseudogene predicted pseudogene 6684
Tssr155481 19 20601958 to 20601974 16 + TSS region transcription start site region 155481
Aldh1a1 19 20601982 to 20643462 41480 + protein coding gene aldehyde dehydrogenase family 1, subfamily A1
Tssr155482 19 20640054 to 20640086 32 + TSS region transcription start site region 155482
C730037M02Rik 19 20689466 to 20690526 1060 unclassified gene RIKEN cDNA C730037M02 gene
Aldh1a7 19 20692953 to 20727556 34603 - protein coding gene aldehyde dehydrogenase family 1, subfamily A7
Tssr158562 19 20727533 to 20727568 35 - TSS region transcription start site region 158562
Tmc1 19 20783458 to 20954202 170744 - protein coding gene transmembrane channel-like gene family 1
Tssr155483 19 20919149 to 20919175 26 + TSS region transcription start site region 155483
Gm32750 19 20941769 to 20954762 12993 + lncRNA gene predicted gene, 32750
Tssr158563 19 20954249 to 20954295 46 - TSS region transcription start site region 158563
Gm41817 19 20956541 to 20961920 5379 + lncRNA gene predicted gene, 41817
Tssr158564 19 20964401 to 20964408 7 - TSS region transcription start site region 158564
Tssr5458 19 20967809 to 20967829 20 + TSS region transcription start site region 5458
Tssr158565 19 21053677 to 21053713 36 - TSS region transcription start site region 158565
Tssr158566 19 21077874 to 21077880 6 - TSS region transcription start site region 158566
4930554I06Rik 19 21104710 to 21105538 828 + lncRNA gene RIKEN cDNA 4930554I06 gene
Gm3775 19 21121191 to 21125705 4514 - lncRNA gene predicted gene 3775
Gm32979 19 21138695 to 21146597 7902 + lncRNA gene predicted gene, 32979
Gm45918 19 21165087 to 21210686 45599 - lncRNA gene predicted gene, 45918
Tssr158567 19 21170864 to 21170869 5 - TSS region transcription start site region 158567
Tssr158568 19 21170925 to 21170939 14 - TSS region transcription start site region 158568
Tssr158569 19 21170949 to 21170956 7 - TSS region transcription start site region 158569
Tssr158570 19 21170964 to 21170994 30 - TSS region transcription start site region 158570
Tssr158571 19 21172488 to 21172514 26 - TSS region transcription start site region 158571
Tssr158572 19 21174851 to 21174860 9 - TSS region transcription start site region 158572
Tssr158573 19 21174872 to 21174883 11 - TSS region transcription start site region 158573
Tssr158574 19 21174884 to 21174905 21 - TSS region transcription start site region 158574