Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:20386958-20816974

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anxa1 19 20373434 to 20390671 17237 - protein coding gene annexin A1
Tssr155468 19 20389538 to 20389548 10 + TSS region transcription start site region 155468
Tssr158559 19 20390665 to 20390679 14 - TSS region transcription start site region 158559
Tssr158560 19 20390996 to 20391010 14 - TSS region transcription start site region 158560
Tssr155469 19 20405251 to 20405261 10 + TSS region transcription start site region 155469
Tssr155470 19 20405280 to 20405291 11 + TSS region transcription start site region 155470
1500015L24Rik 19 20405288 to 20422785 17497 + lincRNA gene RIKEN cDNA 1500015L24 gene
Gm32689 19 20424651 to 20435261 10610 - lncRNA gene predicted gene, 32689
D19Mit23 19 20435897 to 20436089 192 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 23
Gm41816 19 20437754 to 20441386 3632 + lncRNA gene predicted gene, 41816
Tssr155471 19 20492217 to 20492241 24 + TSS region transcription start site region 155471
Tssr155472 19 20492265 to 20492272 7 + TSS region transcription start site region 155472
Tssr155473 19 20492577 to 20492588 11 + TSS region transcription start site region 155473
Tssr155474 19 20492606 to 20492617 11 + TSS region transcription start site region 155474
Tssr155475 19 20492663 to 20492670 7 + TSS region transcription start site region 155475
Tssr155476 19 20492678 to 20492689 11 + TSS region transcription start site region 155476
Tssr155477 19 20492694 to 20492747 53 + TSS region transcription start site region 155477
E030003E18Rik 19 20492715 to 20556410 63695 + lncRNA gene RIKEN cDNA E030003E18 gene
Tssr155478 19 20492750 to 20492785 35 + TSS region transcription start site region 155478
Tssr155479 19 20493007 to 20493021 14 + TSS region transcription start site region 155479
Tssr155480 19 20493037 to 20493059 22 + TSS region transcription start site region 155480
Tssr5457 19 20520171 to 20520172 1 + TSS region transcription start site region 5457
C730002L08Rik 19 20534527 to 20552330 17803 - antisense lncRNA gene RIKEN cDNA C730002L08 gene
Tssr158561 19 20536747 to 20536763 16 - TSS region transcription start site region 158561
Tlyr1 19 20562164 to 25336432 4774268 QTL thymic lymphoma resistance 1
D19Mit60 19 20562164 to 20562299 135 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 60
Tgct2 19 20562299 to 3278551 -17283748 QTL testicular germ cell tumor 2
2900002J02Rik 19 20583523 to 20585066 1543 unclassified gene RIKEN cDNA 2900002J02 gene
Gm6684 19 20586073 to 20586757 684 - pseudogene predicted pseudogene 6684
Tssr155481 19 20601958 to 20601974 16 + TSS region transcription start site region 155481
Aldh1a1 19 20601982 to 20643462 41480 + protein coding gene aldehyde dehydrogenase family 1, subfamily A1
Tssr155482 19 20640054 to 20640086 32 + TSS region transcription start site region 155482
C730037M02Rik 19 20689466 to 20690526 1060 unclassified gene RIKEN cDNA C730037M02 gene
Aldh1a7 19 20692953 to 20727556 34603 - protein coding gene aldehyde dehydrogenase family 1, subfamily A7
Tssr158562 19 20727533 to 20727568 35 - TSS region transcription start site region 158562
Tmc1 19 20783458 to 20954202 170744 - protein coding gene transmembrane channel-like gene family 1