Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:19842577-21142588

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32469 19 19821035 to 19979149 158114 + lncRNA gene predicted gene, 32469
Gm3728 19 20005940 to 20028686 22746 - protein coding gene predicted gene 3728
Tssr158545 19 20010139 to 20010148 9 - TSS region transcription start site region 158545
Gm22684 19 20033504 to 20033635 131 - snoRNA gene predicted gene, 22684
Tssr158546 19 20116663 to 20116666 3 - TSS region transcription start site region 158546
Gm32629 19 20123493 to 20283256 159763 - lncRNA gene predicted gene, 32629
Tssr158547 19 20123867 to 20123874 7 - TSS region transcription start site region 158547
Tssr158548 19 20123890 to 20123908 18 - TSS region transcription start site region 158548
Tssr158549 19 20123910 to 20123919 9 - TSS region transcription start site region 158549
D19Mit110 19 20286185 to 20286354 169 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 110
Pas3 19 20345852 to 20345984 132 QTL pulmonary adenoma susceptibility 3
Bits4 19 20345852 to 20345984 132 QTL bitterness sensitivity 4
Skull26 19 20345852 to 20345984 132 QTL skull morphology 26
Faq10 19 20345852 to 20345984 132 QTL fluctuating asymmetry QTL 10
D19Mit16 19 20345852 to 20345984 132 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 16
Tssr158550 19 20372903 to 20372928 25 - TSS region transcription start site region 158550
Tssr155466 19 20373425 to 20373440 15 + TSS region transcription start site region 155466
Anxa1 19 20373434 to 20390671 17237 - protein coding gene annexin A1
Tssr158551 19 20373560 to 20373701 141 - TSS region transcription start site region 158551
Tssr158552 19 20373705 to 20373739 34 - TSS region transcription start site region 158552
Tssr158553 19 20375271 to 20375355 84 - TSS region transcription start site region 158553
Tssr158554 19 20378411 to 20378471 60 - TSS region transcription start site region 158554
Tssr158555 19 20379673 to 20379714 41 - TSS region transcription start site region 158555
Tssr155467 19 20382040 to 20382057 17 + TSS region transcription start site region 155467
Tssr158556 19 20382886 to 20382986 100 - TSS region transcription start site region 158556
Tssr158557 19 20384531 to 20384560 29 - TSS region transcription start site region 158557
Tssr158558 19 20385631 to 20385635 4 - TSS region transcription start site region 158558
Tssr155468 19 20389538 to 20389548 10 + TSS region transcription start site region 155468
Tssr158559 19 20390665 to 20390679 14 - TSS region transcription start site region 158559
Tssr158560 19 20390996 to 20391010 14 - TSS region transcription start site region 158560
Tssr155469 19 20405251 to 20405261 10 + TSS region transcription start site region 155469
Tssr155470 19 20405280 to 20405291 11 + TSS region transcription start site region 155470
1500015L24Rik 19 20405288 to 20422785 17497 + lincRNA gene RIKEN cDNA 1500015L24 gene
Gm32689 19 20424651 to 20435261 10610 - lncRNA gene predicted gene, 32689
D19Mit23 19 20435897 to 20436089 192 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 23
Gm41816 19 20437754 to 20441386 3632 + lncRNA gene predicted gene, 41816
Tssr155471 19 20492217 to 20492241 24 + TSS region transcription start site region 155471
Tssr155472 19 20492265 to 20492272 7 + TSS region transcription start site region 155472
Tssr155473 19 20492577 to 20492588 11 + TSS region transcription start site region 155473
Tssr155474 19 20492606 to 20492617 11 + TSS region transcription start site region 155474
Tssr155475 19 20492663 to 20492670 7 + TSS region transcription start site region 155475
Tssr155476 19 20492678 to 20492689 11 + TSS region transcription start site region 155476
Tssr155477 19 20492694 to 20492747 53 + TSS region transcription start site region 155477
E030003E18Rik 19 20492715 to 20556410 63695 + lncRNA gene RIKEN cDNA E030003E18 gene
Tssr155478 19 20492750 to 20492785 35 + TSS region transcription start site region 155478
Tssr155479 19 20493007 to 20493021 14 + TSS region transcription start site region 155479
Tssr155480 19 20493037 to 20493059 22 + TSS region transcription start site region 155480
Tssr5457 19 20520171 to 20520172 1 + TSS region transcription start site region 5457
C730002L08Rik 19 20534527 to 20552330 17803 - antisense lncRNA gene RIKEN cDNA C730002L08 gene
Tssr158561 19 20536747 to 20536763 16 - TSS region transcription start site region 158561
D19Mit60 19 20562164 to 20562299 135 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 60
Tlyr1 19 20562164 to 25336432 4774268 QTL thymic lymphoma resistance 1
Tgct2 19 20562299 to 3278551 -17283748 QTL testicular germ cell tumor 2
2900002J02Rik 19 20583523 to 20585066 1543 unclassified gene RIKEN cDNA 2900002J02 gene
Gm6684 19 20586073 to 20586757 684 - pseudogene predicted pseudogene 6684
Tssr155481 19 20601958 to 20601974 16 + TSS region transcription start site region 155481
Aldh1a1 19 20601982 to 20643462 41480 + protein coding gene aldehyde dehydrogenase family 1, subfamily A1
Tssr155482 19 20640054 to 20640086 32 + TSS region transcription start site region 155482
C730037M02Rik 19 20689466 to 20690526 1060 unclassified gene RIKEN cDNA C730037M02 gene
Aldh1a7 19 20692953 to 20727556 34603 - protein coding gene aldehyde dehydrogenase family 1, subfamily A7
Tssr158562 19 20727533 to 20727568 35 - TSS region transcription start site region 158562
Tmc1 19 20783458 to 20954202 170744 - protein coding gene transmembrane channel-like gene family 1
Tssr155483 19 20919149 to 20919175 26 + TSS region transcription start site region 155483
Gm32750 19 20941769 to 20954762 12993 + lncRNA gene predicted gene, 32750
Tssr158563 19 20954249 to 20954295 46 - TSS region transcription start site region 158563
Gm41817 19 20956541 to 20961920 5379 + lncRNA gene predicted gene, 41817
Tssr158564 19 20964401 to 20964408 7 - TSS region transcription start site region 158564
Tssr5458 19 20967809 to 20967829 20 + TSS region transcription start site region 5458
Tssr158565 19 21053677 to 21053713 36 - TSS region transcription start site region 158565
Tssr158566 19 21077874 to 21077880 6 - TSS region transcription start site region 158566
4930554I06Rik 19 21104710 to 21105538 828 + lncRNA gene RIKEN cDNA 4930554I06 gene
Gm3775 19 21121191 to 21125705 4514 - lncRNA gene predicted gene 3775
Gm32979 19 21138695 to 21146597 7902 + lncRNA gene predicted gene, 32979