Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:18710516-19360517

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10669 19 18712779 to 18713851 1072 CpG island CpG island 10669
Tssr155451 19 18713165 to 18713187 22 + TSS region transcription start site region 155451
Tssr155452 19 18713192 to 18713212 20 + TSS region transcription start site region 155452
D030056L22Rik 19 18713193 to 18718428 5235 + protein coding gene RIKEN cDNA D030056L22 gene
Tssr155453 19 18713225 to 18713243 18 + TSS region transcription start site region 155453
Tssr155454 19 18730612 to 18730617 5 + TSS region transcription start site region 155454
Tssr155455 19 18730630 to 18730649 19 + TSS region transcription start site region 155455
Tssr155456 19 18730658 to 18730689 31 + TSS region transcription start site region 155456
Tssr155457 19 18731429 to 18731440 11 + TSS region transcription start site region 155457
Tssr155458 19 18732740 to 18732743 3 + TSS region transcription start site region 155458
Gm23238 19 18732741 to 18732904 163 + snRNA gene predicted gene, 23238
Gm41814 19 18736739 to 18749516 12777 - lncRNA gene predicted gene, 41814
Tssr158522 19 18748515 to 18748519 4 - TSS region transcription start site region 158522
Cpgi10670 19 18749624 to 18750136 512 CpG island CpG island 10670
Tssr155459 19 18749724 to 18749743 19 + TSS region transcription start site region 155459
Tssr155460 19 18749745 to 18749768 23 + TSS region transcription start site region 155460
Trpm6 19 18749983 to 18892510 142527 + protein coding gene transient receptor potential cation channel, subfamily M, member 6
Tssr155461 19 18758607 to 18758645 38 + TSS region transcription start site region 155461
Tssr155462 19 18776172 to 18776182 10 + TSS region transcription start site region 155462
Gm24190 19 18776746 to 18776961 215 - unclassified non-coding RNA gene predicted gene, 24190
Tssr155463 19 18840606 to 18840618 12 + TSS region transcription start site region 155463
Tssr155464 19 18840640 to 18840649 9 + TSS region transcription start site region 155464
Tssr155465 19 18855668 to 18855672 4 + TSS region transcription start site region 155465
Tssr5456 19 18888089 to 18888093 4 + TSS region transcription start site region 5456
Rorb 19 18930609 to 19111196 180587 - protein coding gene RAR-related orphan receptor beta
Tssr158523 19 18936154 to 18936156 2 - TSS region transcription start site region 158523
Tssr158524 19 18936377 to 18936384 7 - TSS region transcription start site region 158524
Tssr158525 19 18936391 to 18936428 37 - TSS region transcription start site region 158525
Tssr158526 19 18936496 to 18936499 3 - TSS region transcription start site region 158526
Tssr158527 19 18936597 to 18936606 9 - TSS region transcription start site region 158527
Tssr158528 19 18936613 to 18936625 12 - TSS region transcription start site region 158528
Tssr158529 19 18936691 to 18936709 18 - TSS region transcription start site region 158529
Cpgi10671 19 18977636 to 18977980 344 CpG island CpG island 10671
Tssr158530 19 19001070 to 19001075 5 - TSS region transcription start site region 158530
Tssr158531 19 19001099 to 19001119 20 - TSS region transcription start site region 158531
Tssr158532 19 19001148 to 19001151 3 - TSS region transcription start site region 158532
Tssr158533 19 19005239 to 19005262 23 - TSS region transcription start site region 158533
Tssr158534 19 19032243 to 19032249 6 - TSS region transcription start site region 158534
Tssr158535 19 19035516 to 19035517 1 - TSS region transcription start site region 158535
Tssr158536 19 19050951 to 19050954 3 - TSS region transcription start site region 158536
Tssr158537 19 19067588 to 19067629 41 - TSS region transcription start site region 158537
Tssr158538 19 19079076 to 19079091 15 - TSS region transcription start site region 158538
Tssr158539 19 19079542 to 19079545 3 - TSS region transcription start site region 158539
Tssr158540 19 19099773 to 19099777 4 - TSS region transcription start site region 158540
Tssr158541 19 19100270 to 19100273 3 - TSS region transcription start site region 158541
Cpgi10672 19 19110061 to 19110818 757 CpG island CpG island 10672
Tssr158542 19 19110939 to 19110950 11 - TSS region transcription start site region 158542
Cpgi10673 19 19111065 to 19111633 568 CpG island CpG island 10673
Tssr158543 19 19111181 to 19111203 22 - TSS region transcription start site region 158543
Tssr158544 19 19111207 to 19111221 14 - TSS region transcription start site region 158544
Gm25437 19 19275899 to 19276030 131 + snoRNA gene predicted gene, 25437
Gm41815 19 19284543 to 19319645 35102 + lncRNA gene predicted gene, 41815
D19Mit113 19 19356373 to 19356514 141 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology-113