Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:17720166-18690795

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcsk5 19 17432832 to 17837632 404800 - protein coding gene proprotein convertase subtilisin/kexin type 5
Cpgi10665 19 17835798 to 17836270 472 CpG island CpG island 10665
Cpgi10666 19 17836493 to 17837865 1372 CpG island CpG island 10666
Tssr158513 19 17837620 to 17837642 22 - TSS region transcription start site region 158513
Gm22880 19 17865317 to 17865419 102 - snRNA gene predicted gene, 22880
Gm23063 19 17891959 to 17892051 92 - miRNA gene predicted gene, 23063
Tssr158514 19 17901196 to 17901198 2 - TSS region transcription start site region 158514
Tssr155441 19 17926552 to 17926555 3 + TSS region transcription start site region 155441
Eef1a1-ps1 19 17926557 to 17928613 2056 + pseudogene eukaryotic translation elongation factor 1 alpha 1, pseudogene 1
Gm23061 19 17928111 to 17928226 115 + miRNA gene predicted gene, 23061
D19Dcr77 19 17972361 to 17972456 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 77
D19Dcr78 19 18015254 to 18015349 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 78
Tssr5454 19 18063876 to 18063877 1 + TSS region transcription start site region 5454
Gm18610 19 18205166 to 18205795 629 - pseudogene predicted gene, 18610
D19Mit85 19 18529681 to 18529936 255 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 85
Rpl29-ps6 19 18565138 to 18565755 617 + pseudogene ribosomal protein L29, pseudogene 6
Tssr158515 19 18568036 to 18568041 5 - TSS region transcription start site region 158515
Ostf1 19 18580364 to 18631813 51449 - protein coding gene osteoclast stimulating factor 1
Tssr155442 19 18581429 to 18581439 10 + TSS region transcription start site region 155442
Gm8250 19 18581455 to 18582228 773 + pseudogene predicted gene 8250
Tssr158516 19 18589729 to 18589761 32 - TSS region transcription start site region 158516
Tssr158517 19 18596729 to 18596733 4 - TSS region transcription start site region 158517
1110034N17Rik 19 18627446 to 18627920 474 unclassified gene RIKEN cDNA 1110034N17 gene
Tssr158518 19 18630906 to 18630909 3 - TSS region transcription start site region 158518
Cpgi10667 19 18631180 to 18632224 1044 CpG island CpG island 10667
Tssr158519 19 18631748 to 18631753 5 - TSS region transcription start site region 158519
Tssr158520 19 18631754 to 18631824 70 - TSS region transcription start site region 158520
Tssr158521 19 18631834 to 18631847 13 - TSS region transcription start site region 158521
Tssr155443 19 18631927 to 18631963 36 + TSS region transcription start site region 155443
Nmrk1 19 18631950 to 18652194 20244 + protein coding gene nicotinamide riboside kinase 1
Tssr155444 19 18631979 to 18632008 29 + TSS region transcription start site region 155444
Cpgi10668 19 18670489 to 18671766 1277 CpG island CpG island 10668
Tssr155445 19 18670724 to 18670779 55 + TSS region transcription start site region 155445
Tssr155446 19 18670780 to 18670810 30 + TSS region transcription start site region 155446
Carnmt1 19 18670780 to 18704788 34008 + protein coding gene carnosine N-methyltransferase 1
Tssr155447 19 18670812 to 18670849 37 + TSS region transcription start site region 155447
Tssr155448 19 18670908 to 18670928 20 + TSS region transcription start site region 155448
Tssr5455 19 18670940 to 18670950 10 + TSS region transcription start site region 5455
Tssr155449 19 18671190 to 18671201 11 + TSS region transcription start site region 155449
Chab5 19 18676400 to 18676563 163 QTL cholesterol absorption 5
D19Mit41 19 18676400 to 18676563 163 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 41
Tssr155450 19 18681242 to 18681243 1 + TSS region transcription start site region 155450