Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:17372558-17893490

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr158504 19 17372836 to 17372850 14 - TSS region transcription start site region 158504
Tssr158505 19 17372864 to 17372875 11 - TSS region transcription start site region 158505
Tssr158506 19 17372915 to 17372926 11 - TSS region transcription start site region 158506
Cpgi10663 19 17393616 to 17394640 1024 CpG island CpG island 10663
Tssr155430 19 17394037 to 17394091 54 + TSS region transcription start site region 155430
Rfk 19 17394043 to 17401349 7306 + protein coding gene riboflavin kinase
Tssr155431 19 17394096 to 17394122 26 + TSS region transcription start site region 155431
Tssr158507 19 17394469 to 17394485 16 - TSS region transcription start site region 158507
Tssr158508 19 17394490 to 17394516 26 - TSS region transcription start site region 158508
Tssr158509 19 17394518 to 17394531 13 - TSS region transcription start site region 158509
Tssr155432 19 17394790 to 17394840 50 + TSS region transcription start site region 155432
Tssr155433 19 17395029 to 17395037 8 + TSS region transcription start site region 155433
Tssr155434 19 17399608 to 17399622 14 + TSS region transcription start site region 155434
Tssr155435 19 17400183 to 17400199 16 + TSS region transcription start site region 155435
Tssr155436 19 17400236 to 17400290 54 + TSS region transcription start site region 155436
Tssr155437 19 17400542 to 17400546 4 + TSS region transcription start site region 155437
Tssr155438 19 17401118 to 17401122 4 + TSS region transcription start site region 155438
Pcsk5 19 17432832 to 17837632 404800 - protein coding gene proprotein convertase subtilisin/kexin type 5
Cpgi10664 19 17433419 to 17433732 313 CpG island CpG island 10664
Tssr155439 19 17479678 to 17479691 13 + TSS region transcription start site region 155439
D19Dcr4 19 17498562 to 17498662 100 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 4
Tssr158510 19 17511395 to 17511411 16 - TSS region transcription start site region 158510
Tssr158511 19 17511415 to 17511420 5 - TSS region transcription start site region 158511
Tssr155440 19 17517270 to 17517275 5 + TSS region transcription start site region 155440
D19Dcr5 19 17533129 to 17533224 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 5
Gm41813 19 17536046 to 17555945 19899 + lncRNA gene predicted gene, 41813
Tssr158512 19 17560024 to 17560027 3 - TSS region transcription start site region 158512
Gm41812 19 17573784 to 17580645 6861 + lncRNA gene predicted gene, 41812
C430005N20Rik 19 17632558 to 17633490 932 unclassified gene RIKEN cDNA C430005N20 gene
Gm17819 19 17692776 to 17693534 758 + pseudogene predicted gene, 17819
Cpgi10665 19 17835798 to 17836270 472 CpG island CpG island 10665
Cpgi10666 19 17836493 to 17837865 1372 CpG island CpG island 10666
Tssr158513 19 17837620 to 17837642 22 - TSS region transcription start site region 158513
Gm22880 19 17865317 to 17865419 102 - snRNA gene predicted gene, 22880
Gm23063 19 17891959 to 17892051 92 - miRNA gene predicted gene, 23063