Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:16871118-17308932

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10656 19 16871269 to 16871504 235 CpG island CpG island 10656
Cpgi10657 19 16872239 to 16873740 1501 CpG island CpG island 10657
Foxb2 19 16872316 to 16873830 1514 - protein coding gene forkhead box B2
Cpgi10658 19 16874111 to 16874873 762 CpG island CpG island 10658
Cpgi10659 19 16876235 to 16876757 522 CpG island CpG island 10659
Acigg12 19 16881461 to 16881461 0 QTL anti COL7 IgG3 antibody 12
Gm32341 19 16919543 to 16925008 5465 + lncRNA gene predicted gene, 32341
Tssr155413 19 16919638 to 16919653 15 + TSS region transcription start site region 155413
Tssr155414 19 16955687 to 16955701 14 + TSS region transcription start site region 155414
Cpgi10660 19 16955697 to 16956369 672 CpG island CpG island 10660
Tssr155415 19 16955960 to 16955980 20 + TSS region transcription start site region 155415
Tssr155416 19 16956064 to 16956075 11 + TSS region transcription start site region 155416
Tssr155417 19 16956110 to 16956124 14 + TSS region transcription start site region 155417
Prune2 19 16956118 to 17223932 267814 + protein coding gene prune homolog 2
Tssr155418 19 16956164 to 16956171 7 + TSS region transcription start site region 155418
Gm27970 19 17056781 to 17057187 406 - unclassified non-coding RNA gene predicted gene, 27970
Gm27796 19 17060137 to 17060397 260 - unclassified non-coding RNA gene predicted gene, 27796
Tssr158489 19 17125428 to 17125479 51 - TSS region transcription start site region 158489
Tssr158490 19 17125521 to 17125542 21 - TSS region transcription start site region 158490
Tssr158491 19 17125584 to 17125598 14 - TSS region transcription start site region 158491
Tssr155419 19 17125618 to 17125670 52 + TSS region transcription start site region 155419
Tssr155420 19 17136744 to 17136781 37 + TSS region transcription start site region 155420
Tssr155421 19 17136808 to 17136819 11 + TSS region transcription start site region 155421
Tssr155422 19 17136833 to 17136838 5 + TSS region transcription start site region 155422
Tssr5453 19 17145555 to 17145559 4 + TSS region transcription start site region 5453
Cpgi10661 19 17163590 to 17163825 235 CpG island CpG island 10661
Tssr158492 19 17166444 to 17166486 42 - TSS region transcription start site region 158492
Tssr155423 19 17205531 to 17205542 11 + TSS region transcription start site region 155423
Tssr155424 19 17222476 to 17222488 12 + TSS region transcription start site region 155424
Tssr155425 19 17222573 to 17222589 16 + TSS region transcription start site region 155425
Tssr155426 19 17222651 to 17222654 3 + TSS region transcription start site region 155426
Tssr155427 19 17222731 to 17222732 1 + TSS region transcription start site region 155427
D19Mit128 19 17250645 to 17250768 123 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 128
D19Mit129 19 17252156 to 17252270 114 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 129
Tssr158493 19 17278452 to 17278466 14 - TSS region transcription start site region 158493