Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:16725697-17186369

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps13a 19 16615366 to 16780933 165567 - protein coding gene vacuolar protein sorting 13A
Tssr158482 19 16731453 to 16731456 3 - TSS region transcription start site region 158482
Cpgi10653 19 16780112 to 16781412 1300 CpG island CpG island 10653
Gm9806 19 16780547 to 16781103 556 + pseudogene predicted gene 9806
Tssr158483 19 16780826 to 16780835 9 - TSS region transcription start site region 158483
Tssr158484 19 16780872 to 16780897 25 - TSS region transcription start site region 158484
Tssr158485 19 16780903 to 16780967 64 - TSS region transcription start site region 158485
Tssr158486 19 16780979 to 16780990 11 - TSS region transcription start site region 158486
Tssr158487 19 16781065 to 16781075 10 - TSS region transcription start site region 158487
Tssr158488 19 16781096 to 16781107 11 - TSS region transcription start site region 158488
Tssr155412 19 16781111 to 16781120 9 + TSS region transcription start site region 155412
Cpgi10654 19 16808758 to 16809103 345 CpG island CpG island 10654
Cpgi10655 19 16870410 to 16870766 356 CpG island CpG island 10655
Cpgi10656 19 16871269 to 16871504 235 CpG island CpG island 10656
Cpgi10657 19 16872239 to 16873740 1501 CpG island CpG island 10657
Foxb2 19 16872316 to 16873830 1514 - protein coding gene forkhead box B2
Cpgi10658 19 16874111 to 16874873 762 CpG island CpG island 10658
Cpgi10659 19 16876235 to 16876757 522 CpG island CpG island 10659
Acigg12 19 16881461 to 16881461 0 QTL anti COL7 IgG3 antibody 12
Gm32341 19 16919543 to 16925008 5465 + lncRNA gene predicted gene, 32341
Tssr155413 19 16919638 to 16919653 15 + TSS region transcription start site region 155413
Tssr155414 19 16955687 to 16955701 14 + TSS region transcription start site region 155414
Cpgi10660 19 16955697 to 16956369 672 CpG island CpG island 10660
Tssr155415 19 16955960 to 16955980 20 + TSS region transcription start site region 155415
Tssr155416 19 16956064 to 16956075 11 + TSS region transcription start site region 155416
Tssr155417 19 16956110 to 16956124 14 + TSS region transcription start site region 155417
Prune2 19 16956118 to 17223932 267814 + protein coding gene prune homolog 2
Tssr155418 19 16956164 to 16956171 7 + TSS region transcription start site region 155418
Gm27970 19 17056781 to 17057187 406 - unclassified non-coding RNA gene predicted gene, 27970
Gm27796 19 17060137 to 17060397 260 - unclassified non-coding RNA gene predicted gene, 27796
Tssr158489 19 17125428 to 17125479 51 - TSS region transcription start site region 158489
Tssr158490 19 17125521 to 17125542 21 - TSS region transcription start site region 158490
Tssr158491 19 17125584 to 17125598 14 - TSS region transcription start site region 158491
Tssr155419 19 17125618 to 17125670 52 + TSS region transcription start site region 155419
Tssr155420 19 17136744 to 17136781 37 + TSS region transcription start site region 155420
Tssr155421 19 17136808 to 17136819 11 + TSS region transcription start site region 155421
Tssr155422 19 17136833 to 17136838 5 + TSS region transcription start site region 155422
Tssr5453 19 17145555 to 17145559 4 + TSS region transcription start site region 5453
Cpgi10661 19 17163590 to 17163825 235 CpG island CpG island 10661
Tssr158492 19 17166444 to 17166486 42 - TSS region transcription start site region 158492