Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:15825762-16805775

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbctlp1 19 15897664 to 15897810 146 QTL peripheral blood cytotoxic T lymphocyte percentage 1
D19Mit28 19 15897664 to 15897810 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 28
Psat1 19 15905123 to 15925059 19936 - protein coding gene phosphoserine aminotransferase 1
Tssr158470 19 15920179 to 15920182 3 - TSS region transcription start site region 158470
Tssr155376 19 15923690 to 15923696 6 + TSS region transcription start site region 155376
Cpgi10649 19 15924203 to 15925447 1244 CpG island CpG island 10649
Tssr158471 19 15924560 to 15924569 9 - TSS region transcription start site region 158471
Tssr158472 19 15924928 to 15925015 87 - TSS region transcription start site region 158472
Gm3329 19 15943610 to 15944165 555 + pseudogene predicted gene 3329
Cep78 19 15955774 to 15984989 29215 - protein coding gene centrosomal protein 78
Tssr158473 19 15959201 to 15959204 3 - TSS region transcription start site region 158473
Tssr158474 19 15962522 to 15962534 12 - TSS region transcription start site region 158474
Cpgi10650 19 15984347 to 15985261 914 CpG island CpG island 10650
Tssr158475 19 15984945 to 15984962 17 - TSS region transcription start site region 158475
Tssr158476 19 15984970 to 15985018 48 - TSS region transcription start site region 158476
Tssr155377 19 15985051 to 15985105 54 + TSS region transcription start site region 155377
C130060C02Rik 19 15985090 to 16010912 25822 + lincRNA gene RIKEN cDNA C130060C02 gene
Tssr155378 19 16025409 to 16025439 30 + TSS region transcription start site region 155378
Rpl37-ps1 19 16025498 to 16025762 264 + pseudogene ribosomal protein 37, pseudogene 1
Tssr158477 19 16036095 to 16036118 23 - TSS region transcription start site region 158477
Tssr158478 19 16060045 to 16060052 7 - TSS region transcription start site region 158478
Gm32026 19 16064113 to 16090591 26478 + lncRNA gene predicted gene, 32026
Cpgi10651 19 16132184 to 16134090 1906 CpG island CpG island 10651
Tssr155379 19 16132662 to 16132721 59 + TSS region transcription start site region 155379
Tssr155380 19 16132746 to 16132773 27 + TSS region transcription start site region 155380
Tssr155381 19 16132774 to 16132795 21 + TSS region transcription start site region 155381
Tssr155382 19 16132812 to 16132910 98 + TSS region transcription start site region 155382
Gnaq 19 16132831 to 16387453 254622 + protein coding gene guanine nucleotide binding protein, alpha q polypeptide
Tssr155383 19 16133122 to 16133145 23 + TSS region transcription start site region 155383
Tssr155384 19 16133301 to 16133328 27 + TSS region transcription start site region 155384
Tssr155385 19 16141082 to 16141083 1 + TSS region transcription start site region 155385
Tssr155386 19 16146086 to 16146100 14 + TSS region transcription start site region 155386
D19Mit52 19 16146324 to 16146460 136 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 52
Tssr155387 19 16149076 to 16149112 36 + TSS region transcription start site region 155387
Tssr155388 19 16158732 to 16158775 43 + TSS region transcription start site region 155388
E030024N20Rik 19 16164312 to 16164805 493 - pseudogene RIKEN cDNA E030024N20 gene
Tssr155389 19 16225191 to 16225198 7 + TSS region transcription start site region 155389
Tssr155390 19 16226954 to 16226964 10 + TSS region transcription start site region 155390
Gm10819 19 16267061 to 16267621 560 - pseudogene predicted gene 10819
Tssr158479 19 16267635 to 16267643 8 - TSS region transcription start site region 158479
Gm17068 19 16277797 to 16278776 979 + pseudogene predicted gene 17068
Mir496b 19 16314892 to 16315004 112 - miRNA gene microRNA 496b
Tssr155391 19 16315762 to 16315775 13 + TSS region transcription start site region 155391
Tssr155392 19 16318052 to 16318078 26 + TSS region transcription start site region 155392
Tssr155393 19 16318410 to 16318429 19 + TSS region transcription start site region 155393
Tssr155394 19 16320534 to 16320553 19 + TSS region transcription start site region 155394
Tssr155395 19 16328626 to 16328637 11 + TSS region transcription start site region 155395
Tssr155396 19 16349523 to 16349537 14 + TSS region transcription start site region 155396
Tssr155397 19 16349546 to 16349565 19 + TSS region transcription start site region 155397
Tssr155398 19 16349613 to 16349630 17 + TSS region transcription start site region 155398
Tssr155399 19 16359301 to 16359320 19 + TSS region transcription start site region 155399
Tssr155400 19 16383615 to 16383630 15 + TSS region transcription start site region 155400
Tssr155401 19 16384290 to 16384302 12 + TSS region transcription start site region 155401
Tssr155402 19 16384855 to 16384871 16 + TSS region transcription start site region 155402
Tssr155403 19 16385679 to 16385694 15 + TSS region transcription start site region 155403
Tssr155404 19 16385738 to 16385752 14 + TSS region transcription start site region 155404
Tssr155405 19 16385791 to 16385806 15 + TSS region transcription start site region 155405
Tssr155406 19 16385865 to 16385875 10 + TSS region transcription start site region 155406
Tssr155407 19 16385924 to 16385944 20 + TSS region transcription start site region 155407
Tssr155408 19 16385951 to 16385967 16 + TSS region transcription start site region 155408
Tssr158480 19 16386109 to 16386122 13 - TSS region transcription start site region 158480
Tssr155409 19 16387231 to 16387267 36 + TSS region transcription start site region 155409
Gm19312 19 16413431 to 16414000 569 + pseudogene predicted gene, 19312
Tssr155410 19 16435616 to 16435630 14 + TSS region transcription start site region 155410
Gna14 19 16435667 to 16610818 175151 + protein coding gene guanine nucleotide binding protein, alpha 14
Cpgi10652 19 16435738 to 16437010 1272 CpG island CpG island 10652
Tssr155411 19 16436195 to 16436209 14 + TSS region transcription start site region 155411
Gm8222 19 16477107 to 16491122 14015 - pseudogene predicted gene 8222
Gm41811 19 16580085 to 16583462 3377 - lncRNA gene predicted gene, 41811
E230008J23Rik 19 16612195 to 16614868 2673 unclassified gene RIKEN cDNA E230008J23 gene
Vps13a 19 16615366 to 16780933 165567 - protein coding gene vacuolar protein sorting 13A
Tssr158481 19 16657781 to 16657785 4 - TSS region transcription start site region 158481
Gm32256 19 16715799 to 16716261 462 + pseudogene predicted gene, 32256
Tssr158482 19 16731453 to 16731456 3 - TSS region transcription start site region 158482
Cpgi10653 19 16780112 to 16781412 1300 CpG island CpG island 10653
Gm9806 19 16780547 to 16781103 556 + pseudogene predicted gene 9806
Tssr158483 19 16780826 to 16780835 9 - TSS region transcription start site region 158483
Tssr158484 19 16780872 to 16780897 25 - TSS region transcription start site region 158484
Tssr158485 19 16780903 to 16780967 64 - TSS region transcription start site region 158485
Tssr158486 19 16780979 to 16780990 11 - TSS region transcription start site region 158486
Tssr158487 19 16781065 to 16781075 10 - TSS region transcription start site region 158487
Tssr158488 19 16781096 to 16781107 11 - TSS region transcription start site region 158488
Tssr155412 19 16781111 to 16781120 9 + TSS region transcription start site region 155412