Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:15139200-16059220

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7159 19 15193521 to 15194233 712 - pseudogene predicted gene 7159
Tssr158469 19 15194232 to 15194234 2 - TSS region transcription start site region 158469
Gm46645 19 15290167 to 15340387 50220 - lncRNA gene predicted gene, 46645
Datd 19 15362335 to 15362870 535 QTL dopamine transporter density
Pomc-ps1 19 15362335 to 15362870 535 + pseudogene pro-opiomelanocortin, pseudogene 1
Cpgi10647 19 15362349 to 15362655 306 CpG island CpG island 10647
Selenok-ps3 19 15458964 to 15459672 708 - pseudogene selenoprotein K, pseudogene 3
D19Mit61 19 15524672 to 15524799 127 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 61
Gm31594 19 15599131 to 15632101 32970 + lncRNA gene predicted gene, 31594
Tssr155374 19 15599200 to 15599220 20 + TSS region transcription start site region 155374
Tssr155375 19 15599252 to 15599256 4 + TSS region transcription start site region 155375
Gm46665 19 15636548 to 15662923 26375 + lncRNA gene predicted gene, 46665
Gm31733 19 15659946 to 15664346 4400 - lncRNA gene predicted gene, 31733
Gm24319 19 15680004 to 15680110 106 + snRNA gene predicted gene, 24319
Cpgi10648 19 15802048 to 15802253 205 CpG island CpG island 10648
D19Mit28 19 15897664 to 15897810 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 28
Pbctlp1 19 15897664 to 15897810 146 QTL peripheral blood cytotoxic T lymphocyte percentage 1
Psat1 19 15905123 to 15925059 19936 - protein coding gene phosphoserine aminotransferase 1
Tssr158470 19 15920179 to 15920182 3 - TSS region transcription start site region 158470
Tssr155376 19 15923690 to 15923696 6 + TSS region transcription start site region 155376
Cpgi10649 19 15924203 to 15925447 1244 CpG island CpG island 10649
Tssr158471 19 15924560 to 15924569 9 - TSS region transcription start site region 158471
Tssr158472 19 15924928 to 15925015 87 - TSS region transcription start site region 158472
Gm3329 19 15943610 to 15944165 555 + pseudogene predicted gene 3329
Cep78 19 15955774 to 15984989 29215 - protein coding gene centrosomal protein 78
Tssr158473 19 15959201 to 15959204 3 - TSS region transcription start site region 158473
Tssr158474 19 15962522 to 15962534 12 - TSS region transcription start site region 158474
Cpgi10650 19 15984347 to 15985261 914 CpG island CpG island 10650
Tssr158475 19 15984945 to 15984962 17 - TSS region transcription start site region 158475
Tssr158476 19 15984970 to 15985018 48 - TSS region transcription start site region 158476
Tssr155377 19 15985051 to 15985105 54 + TSS region transcription start site region 155377
C130060C02Rik 19 15985090 to 16010912 25822 + lincRNA gene RIKEN cDNA C130060C02 gene
Tssr155378 19 16025409 to 16025439 30 + TSS region transcription start site region 155378
Rpl37-ps1 19 16025498 to 16025762 264 + pseudogene ribosomal protein 37, pseudogene 1
Tssr158477 19 16036095 to 16036118 23 - TSS region transcription start site region 158477