Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:14484200-16714220

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111 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tle4 19 14448072 to 14598051 149979 - protein coding gene transducin-like enhancer of split 4
Tssr158458 19 14494196 to 14494200 4 - TSS region transcription start site region 158458
Tssr158459 19 14543400 to 14543405 5 - TSS region transcription start site region 158459
D19Mit116 19 14562940 to 14563062 122 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 116
Gm31441 19 14564458 to 14566993 2535 + lncRNA gene predicted gene, 31441
Cpgi10645 19 14596841 to 14599303 2462 CpG island CpG island 10645
Tssr158460 19 14597148 to 14597173 25 - TSS region transcription start site region 158460
Tssr158461 19 14597697 to 14597722 25 - TSS region transcription start site region 158461
Tssr158462 19 14597733 to 14597749 16 - TSS region transcription start site region 158462
Tssr158463 19 14597757 to 14597795 38 - TSS region transcription start site region 158463
Tssr158464 19 14598005 to 14598016 11 - TSS region transcription start site region 158464
Tssr158465 19 14598031 to 14598088 57 - TSS region transcription start site region 158465
Tssr158466 19 14598191 to 14598202 11 - TSS region transcription start site region 158466
Tssr155371 19 14598522 to 14598573 51 + TSS region transcription start site region 155371
Gm37997 19 14658667 to 14658933 266 + unclassified gene predicted gene, 37997
Tssr155372 19 14664371 to 14664407 36 + TSS region transcription start site region 155372
Tssr158467 19 14679861 to 14679888 27 - TSS region transcription start site region 158467
D19Mit95 19 14714219 to 14714317 98 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 95
Gm26026 19 14718358 to 14718480 122 - snRNA gene predicted gene, 26026
Tssr155373 19 14834711 to 14834718 7 + TSS region transcription start site region 155373
Tssr5452 19 14904646 to 14904653 7 + TSS region transcription start site region 5452
Cpgi10646 19 14957779 to 14958011 232 CpG island CpG island 10646
Gm5513 19 14959549 to 14960766 1217 - pseudogene predicted pseudogene 5513
Tssr158468 19 14960781 to 14960784 3 - TSS region transcription start site region 158468
Gm7159 19 15193521 to 15194233 712 - pseudogene predicted gene 7159
Tssr158469 19 15194232 to 15194234 2 - TSS region transcription start site region 158469
Gm46645 19 15290167 to 15340387 50220 - lncRNA gene predicted gene, 46645
Pomc-ps1 19 15362335 to 15362870 535 + pseudogene pro-opiomelanocortin, pseudogene 1
Datd 19 15362335 to 15362870 535 QTL dopamine transporter density
Cpgi10647 19 15362349 to 15362655 306 CpG island CpG island 10647
Selenok-ps3 19 15458964 to 15459672 708 - pseudogene selenoprotein K, pseudogene 3
D19Mit61 19 15524672 to 15524799 127 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 61
Gm31594 19 15599131 to 15632101 32970 + lncRNA gene predicted gene, 31594
Tssr155374 19 15599200 to 15599220 20 + TSS region transcription start site region 155374
Tssr155375 19 15599252 to 15599256 4 + TSS region transcription start site region 155375
Gm46665 19 15636548 to 15662923 26375 + lncRNA gene predicted gene, 46665
Gm31733 19 15659946 to 15664346 4400 - lncRNA gene predicted gene, 31733
Gm24319 19 15680004 to 15680110 106 + snRNA gene predicted gene, 24319
Cpgi10648 19 15802048 to 15802253 205 CpG island CpG island 10648
D19Mit28 19 15897664 to 15897810 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 28
Pbctlp1 19 15897664 to 15897810 146 QTL peripheral blood cytotoxic T lymphocyte percentage 1
Psat1 19 15905123 to 15925059 19936 - protein coding gene phosphoserine aminotransferase 1
Tssr158470 19 15920179 to 15920182 3 - TSS region transcription start site region 158470
Tssr155376 19 15923690 to 15923696 6 + TSS region transcription start site region 155376
Cpgi10649 19 15924203 to 15925447 1244 CpG island CpG island 10649
Tssr158471 19 15924560 to 15924569 9 - TSS region transcription start site region 158471
Tssr158472 19 15924928 to 15925015 87 - TSS region transcription start site region 158472
Gm3329 19 15943610 to 15944165 555 + pseudogene predicted gene 3329
Cep78 19 15955774 to 15984989 29215 - protein coding gene centrosomal protein 78
Tssr158473 19 15959201 to 15959204 3 - TSS region transcription start site region 158473
Tssr158474 19 15962522 to 15962534 12 - TSS region transcription start site region 158474
Cpgi10650 19 15984347 to 15985261 914 CpG island CpG island 10650
Tssr158475 19 15984945 to 15984962 17 - TSS region transcription start site region 158475
Tssr158476 19 15984970 to 15985018 48 - TSS region transcription start site region 158476
Tssr155377 19 15985051 to 15985105 54 + TSS region transcription start site region 155377
C130060C02Rik 19 15985090 to 16010912 25822 + lincRNA gene RIKEN cDNA C130060C02 gene
Tssr155378 19 16025409 to 16025439 30 + TSS region transcription start site region 155378
Rpl37-ps1 19 16025498 to 16025762 264 + pseudogene ribosomal protein 37, pseudogene 1
Tssr158477 19 16036095 to 16036118 23 - TSS region transcription start site region 158477
Tssr158478 19 16060045 to 16060052 7 - TSS region transcription start site region 158478
Gm32026 19 16064113 to 16090591 26478 + lncRNA gene predicted gene, 32026
Cpgi10651 19 16132184 to 16134090 1906 CpG island CpG island 10651
Tssr155379 19 16132662 to 16132721 59 + TSS region transcription start site region 155379
Tssr155380 19 16132746 to 16132773 27 + TSS region transcription start site region 155380
Tssr155381 19 16132774 to 16132795 21 + TSS region transcription start site region 155381
Tssr155382 19 16132812 to 16132910 98 + TSS region transcription start site region 155382
Gnaq 19 16132831 to 16387453 254622 + protein coding gene guanine nucleotide binding protein, alpha q polypeptide
Tssr155383 19 16133122 to 16133145 23 + TSS region transcription start site region 155383
Tssr155384 19 16133301 to 16133328 27 + TSS region transcription start site region 155384
Tssr155385 19 16141082 to 16141083 1 + TSS region transcription start site region 155385
Tssr155386 19 16146086 to 16146100 14 + TSS region transcription start site region 155386
D19Mit52 19 16146324 to 16146460 136 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 52
Tssr155387 19 16149076 to 16149112 36 + TSS region transcription start site region 155387
Tssr155388 19 16158732 to 16158775 43 + TSS region transcription start site region 155388
E030024N20Rik 19 16164312 to 16164805 493 - pseudogene RIKEN cDNA E030024N20 gene
Tssr155389 19 16225191 to 16225198 7 + TSS region transcription start site region 155389
Tssr155390 19 16226954 to 16226964 10 + TSS region transcription start site region 155390
Gm10819 19 16267061 to 16267621 560 - pseudogene predicted gene 10819
Tssr158479 19 16267635 to 16267643 8 - TSS region transcription start site region 158479
Gm17068 19 16277797 to 16278776 979 + pseudogene predicted gene 17068
Mir496b 19 16314892 to 16315004 112 - miRNA gene microRNA 496b
Tssr155391 19 16315762 to 16315775 13 + TSS region transcription start site region 155391
Tssr155392 19 16318052 to 16318078 26 + TSS region transcription start site region 155392
Tssr155393 19 16318410 to 16318429 19 + TSS region transcription start site region 155393
Tssr155394 19 16320534 to 16320553 19 + TSS region transcription start site region 155394
Tssr155395 19 16328626 to 16328637 11 + TSS region transcription start site region 155395
Tssr155396 19 16349523 to 16349537 14 + TSS region transcription start site region 155396
Tssr155397 19 16349546 to 16349565 19 + TSS region transcription start site region 155397
Tssr155398 19 16349613 to 16349630 17 + TSS region transcription start site region 155398
Tssr155399 19 16359301 to 16359320 19 + TSS region transcription start site region 155399
Tssr155400 19 16383615 to 16383630 15 + TSS region transcription start site region 155400
Tssr155401 19 16384290 to 16384302 12 + TSS region transcription start site region 155401
Tssr155402 19 16384855 to 16384871 16 + TSS region transcription start site region 155402
Tssr155403 19 16385679 to 16385694 15 + TSS region transcription start site region 155403
Tssr155404 19 16385738 to 16385752 14 + TSS region transcription start site region 155404
Tssr155405 19 16385791 to 16385806 15 + TSS region transcription start site region 155405
Tssr155406 19 16385865 to 16385875 10 + TSS region transcription start site region 155406
Tssr155407 19 16385924 to 16385944 20 + TSS region transcription start site region 155407
Tssr155408 19 16385951 to 16385967 16 + TSS region transcription start site region 155408
Tssr158480 19 16386109 to 16386122 13 - TSS region transcription start site region 158480
Tssr155409 19 16387231 to 16387267 36 + TSS region transcription start site region 155409
Gm19312 19 16413431 to 16414000 569 + pseudogene predicted gene, 19312
Tssr155410 19 16435616 to 16435630 14 + TSS region transcription start site region 155410
Gna14 19 16435667 to 16610818 175151 + protein coding gene guanine nucleotide binding protein, alpha 14
Cpgi10652 19 16435738 to 16437010 1272 CpG island CpG island 10652
Tssr155411 19 16436195 to 16436209 14 + TSS region transcription start site region 155411
Gm8222 19 16477107 to 16491122 14015 - pseudogene predicted gene 8222
Gm41811 19 16580085 to 16583462 3377 - lncRNA gene predicted gene, 41811
E230008J23Rik 19 16612195 to 16614868 2673 unclassified gene RIKEN cDNA E230008J23 gene
Vps13a 19 16615366 to 16780933 165567 - protein coding gene vacuolar protein sorting 13A
Tssr158481 19 16657781 to 16657785 4 - TSS region transcription start site region 158481