MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:12565868-12616566

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm16274	19	12568235 to 12568826	591	-	pseudogene	predicted gene 16274
Fam111a	19	12573072 to 12589769	16697	+	protein coding gene	family with sequence similarity 111, member A
Tssr155337	19	12573508 to 12573542	34	+	TSS region	transcription start site region 155337
Tssr158444	19	12574226 to 12574252	26	-	TSS region	transcription start site region 158444
Tssr155338	19	12574397 to 12574402	5	+	TSS region	transcription start site region 155338
Tssr155339	19	12585864 to 12585868	4	+	TSS region	transcription start site region 155339
A330040F15Rik	19	12585868 to 12596566	10698	-	lncRNA gene	RIKEN cDNA A330040F15 gene
Cpgi10643	19	12595616 to 12596663	1047		CpG island	CpG island 10643
Tssr155340	19	12595686 to 12595701	15	+	TSS region	transcription start site region 155340
Tssr155341	19	12595717 to 12595751	34	+	TSS region	transcription start site region 155341
4122401K19Rik	19	12595748 to 12598308	2560		unclassified non-coding RNA gene	RIKEN cDNA 4122401K19 gene
Tssr155342	19	12595763 to 12595784	21	+	TSS region	transcription start site region 155342
D19Mit79	19	12597623 to 12597757	134		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 79
Tssr155343	19	12599928 to 12599939	11	+	TSS region	transcription start site region 155343
Tssr155344	19	12599953 to 12600010	57	+	TSS region	transcription start site region 155344
Gm4952	19	12599984 to 12627616	27632	+	protein coding gene	predicted gene 4952
Tssr155345	19	12600044 to 12600051	7	+	TSS region	transcription start site region 155345