Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:12514463-12614490

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31208 19 12517921 to 12524338 6417 - lncRNA gene predicted gene, 31208
Gm47243 19 12519800 to 12523576 3776 + lincRNA gene predicted gene, 47243
Tssr158434 19 12526381 to 12526392 11 - TSS region transcription start site region 158434
Tssr158435 19 12526423 to 12526441 18 - TSS region transcription start site region 158435
Tssr158436 19 12527095 to 12527104 9 - TSS region transcription start site region 158436
Tssr158437 19 12527543 to 12527558 15 - TSS region transcription start site region 158437
Tssr158438 19 12527559 to 12527577 18 - TSS region transcription start site region 158438
Tssr158439 19 12528202 to 12528216 14 - TSS region transcription start site region 158439
Gm6545 19 12528763 to 12530519 1756 - pseudogene predicted gene 6545
Tssr158440 19 12531930 to 12531980 50 - TSS region transcription start site region 158440
Gm47242 19 12539588 to 12540823 1235 - lincRNA gene predicted gene, 47242
Tssr158441 19 12540749 to 12540760 11 - TSS region transcription start site region 158441
Tssr158442 19 12540785 to 12540794 9 - TSS region transcription start site region 158442
Tssr158443 19 12540815 to 12540831 16 - TSS region transcription start site region 158443
Tssr155334 19 12564463 to 12564490 27 + TSS region transcription start site region 155334
Tssr155335 19 12564492 to 12564508 16 + TSS region transcription start site region 155335
Tssr155336 19 12564524 to 12564541 17 + TSS region transcription start site region 155336
Gm16274 19 12568235 to 12568826 591 - pseudogene predicted gene 16274
Fam111a 19 12573072 to 12589769 16697 + protein coding gene family with sequence similarity 111, member A
Tssr155337 19 12573508 to 12573542 34 + TSS region transcription start site region 155337
Tssr158444 19 12574226 to 12574252 26 - TSS region transcription start site region 158444
Tssr155338 19 12574397 to 12574402 5 + TSS region transcription start site region 155338
Tssr155339 19 12585864 to 12585868 4 + TSS region transcription start site region 155339
A330040F15Rik 19 12585868 to 12596566 10698 - lncRNA gene RIKEN cDNA A330040F15 gene
Cpgi10643 19 12595616 to 12596663 1047 CpG island CpG island 10643
Tssr155340 19 12595686 to 12595701 15 + TSS region transcription start site region 155340
Tssr155341 19 12595717 to 12595751 34 + TSS region transcription start site region 155341
4122401K19Rik 19 12595748 to 12598308 2560 unclassified non-coding RNA gene RIKEN cDNA 4122401K19 gene
Tssr155342 19 12595763 to 12595784 21 + TSS region transcription start site region 155342
D19Mit79 19 12597623 to 12597757 134 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 79
Tssr155343 19 12599928 to 12599939 11 + TSS region transcription start site region 155343
Tssr155344 19 12599953 to 12600010 57 + TSS region transcription start site region 155344
Gm4952 19 12599984 to 12627616 27632 + protein coding gene predicted gene 4952
Tssr155345 19 12600044 to 12600051 7 + TSS region transcription start site region 155345