Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:11598516-11809026

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ms4ac 19 10962293 to 11640851 678558 complex/cluster/region membrane-spanning 4-domains, subfamily A cluster
Ms4a6d 19 11586606 to 11604804 18198 - protein coding gene membrane-spanning 4-domains, subfamily A, member 6D
Tssr158369 19 11600409 to 11600437 28 - TSS region transcription start site region 158369
Tssr158370 19 11600668 to 11600689 21 - TSS region transcription start site region 158370
Tssr155263 19 11601825 to 11601865 40 + TSS region transcription start site region 155263
Tssr158371 19 11602087 to 11602101 14 - TSS region transcription start site region 158371
Tssr158372 19 11602188 to 11602204 16 - TSS region transcription start site region 158372
Tssr158373 19 11602211 to 11602222 11 - TSS region transcription start site region 158373
Tssr158374 19 11603011 to 11603023 12 - TSS region transcription start site region 158374
Tssr158375 19 11603034 to 11603048 14 - TSS region transcription start site region 158375
Tssr155264 19 11603166 to 11603197 31 + TSS region transcription start site region 155264
Tssr158376 19 11603197 to 11603296 99 - TSS region transcription start site region 158376
Tssr158377 19 11603297 to 11603330 33 - TSS region transcription start site region 158377
Tssr158378 19 11603426 to 11603437 11 - TSS region transcription start site region 158378
Tssr158379 19 11603875 to 11603888 13 - TSS region transcription start site region 158379
Tssr158380 19 11604714 to 11604724 10 - TSS region transcription start site region 158380
Tssr158381 19 11604733 to 11604748 15 - TSS region transcription start site region 158381
Tssr158382 19 11604749 to 11604766 17 - TSS region transcription start site region 158382
Tssr158383 19 11604768 to 11604793 25 - TSS region transcription start site region 158383
Tssr158384 19 11604808 to 11604817 9 - TSS region transcription start site region 158384
Tssr158385 19 11604828 to 11604833 5 - TSS region transcription start site region 158385
Tssr158386 19 11604843 to 11604864 21 - TSS region transcription start site region 158386
Gm24599 19 11607389 to 11607438 49 - snoRNA gene predicted gene, 24599
Ms4a2 19 11615523 to 11623719 8196 - protein coding gene membrane-spanning 4-domains, subfamily A, member 2
Tssr155265 19 11618948 to 11618951 3 + TSS region transcription start site region 155265
Tssr158387 19 11623678 to 11623709 31 - TSS region transcription start site region 158387
Ms4a3 19 11629499 to 11640851 11352 - protein coding gene membrane-spanning 4-domains, subfamily A, member 3
Tssr158388 19 11640713 to 11640726 13 - TSS region transcription start site region 158388
Tssr158389 19 11640727 to 11640744 17 - TSS region transcription start site region 158389
Tssr158390 19 11640772 to 11640773 1 - TSS region transcription start site region 158390
Tssr158391 19 11640803 to 11640808 5 - TSS region transcription start site region 158391
Tssr158392 19 11640828 to 11640840 12 - TSS region transcription start site region 158392
Tssr158393 19 11640844 to 11640856 12 - TSS region transcription start site region 158393
Oosp2 19 11647284 to 11660559 13275 - protein coding gene oocyte secreted protein 2
Oosp1 19 11667460 to 11691051 23591 - protein coding gene oocyte secreted protein 1
Tssr158394 19 11691026 to 11691058 32 - TSS region transcription start site region 158394
Tssr155266 19 11694987 to 11694999 12 + TSS region transcription start site region 155266
Gm26183 19 11695041 to 11695179 138 + snoRNA gene predicted gene, 26183
Gm25443 19 11695267 to 11695342 75 + snoRNA gene predicted gene, 25443
Tssr155267 19 11697049 to 11697057 8 + TSS region transcription start site region 155267
Oosp3 19 11697055 to 11711858 14803 + protein coding gene oocyte secreted protein 3
Gm19224 19 11703516 to 11704026 510 - pseudogene predicted gene, 19224
Tssr155268 19 11747548 to 11747581 33 + TSS region transcription start site region 155268
Cblif 19 11747554 to 11763447 15893 + protein coding gene cobalamin binding intrinsic factor
Tssr155269 19 11747583 to 11747604 21 + TSS region transcription start site region 155269
Tssr155270 19 11748453 to 11748480 27 + TSS region transcription start site region 155270
Tssr155271 19 11749993 to 11749996 3 + TSS region transcription start site region 155271
Tssr155272 19 11750253 to 11750263 10 + TSS region transcription start site region 155272
Tssr155273 19 11755783 to 11755811 28 + TSS region transcription start site region 155273
Tssr155274 19 11755854 to 11755865 11 + TSS region transcription start site region 155274
Tssr158395 19 11759007 to 11759046 39 - TSS region transcription start site region 158395
Gm46655 19 11760943 to 11763189 2246 - lncRNA gene predicted gene, 46655
Cpgi10633 19 11770256 to 11770742 486 CpG island CpG island 10633
Tssr155275 19 11770357 to 11770406 49 + TSS region transcription start site region 155275
Mrpl16 19 11770415 to 11774944 4529 + protein coding gene mitochondrial ribosomal protein L16
Tssr155276 19 11770418 to 11770440 22 + TSS region transcription start site region 155276
Tssr155277 19 11770441 to 11770463 22 + TSS region transcription start site region 155277
Tssr158396 19 11774940 to 11774945 5 - TSS region transcription start site region 158396
Stx3 19 11775118 to 11819403 44285 - protein coding gene syntaxin 3
Tssr158397 19 11803434 to 11803452 18 - TSS region transcription start site region 158397