Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10854649-11094662

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc15a3 19 10842544 to 10857915 15371 + protein coding gene solute carrier family 15, member 3
Tmem132a 19 10857829 to 10869935 12106 - protein coding gene transmembrane protein 132A
Cpgi10623 19 10858966 to 10859189 223 CpG island CpG island 10623
Tssr155140 19 10859779 to 10859795 16 + TSS region transcription start site region 155140
Tssr155141 19 10859822 to 10859833 11 + TSS region transcription start site region 155141
Tssr155142 19 10859887 to 10859898 11 + TSS region transcription start site region 155142
Cpgi10624 19 10860182 to 10860442 260 CpG island CpG island 10624
Cpgi10625 19 10869261 to 10870001 740 CpG island CpG island 10625
Tssr158250 19 10869745 to 10869752 7 - TSS region transcription start site region 158250
Tssr158251 19 10869757 to 10869798 41 - TSS region transcription start site region 158251
Tmem109 19 10870657 to 10881743 11086 - protein coding gene transmembrane protein 109
Tssr158252 19 10871624 to 10871639 15 - TSS region transcription start site region 158252
Tssr158253 19 10871926 to 10871938 12 - TSS region transcription start site region 158253
Tssr158254 19 10880389 to 10880411 22 - TSS region transcription start site region 158254
Cpgi10626 19 10881197 to 10882163 966 CpG island CpG island 10626
Tssr158255 19 10881677 to 10881717 40 - TSS region transcription start site region 158255
Tssr158256 19 10881723 to 10881766 43 - TSS region transcription start site region 158256
Cpgi10627 19 10895116 to 10895839 723 CpG island CpG island 10627
Tssr155143 19 10895225 to 10895272 47 + TSS region transcription start site region 155143
Prpf19 19 10895231 to 10909559 14328 + protein coding gene pre-mRNA processing factor 19
Tssr155144 19 10895274 to 10895313 39 + TSS region transcription start site region 155144
Tssr155145 19 10895372 to 10895383 11 + TSS region transcription start site region 155145
Tssr155146 19 10895391 to 10895402 11 + TSS region transcription start site region 155146
Tssr155147 19 10895420 to 10895425 5 + TSS region transcription start site region 155147
Zp1 19 10914296 to 10920601 6305 - protein coding gene zona pellucida glycoprotein 1
Tssr158257 19 10920629 to 10920635 6 - TSS region transcription start site region 158257
Tssr155148 19 10937154 to 10937178 24 + TSS region transcription start site region 155148
Ptgdr2 19 10937160 to 10942511 5351 + protein coding gene prostaglandin D2 receptor 2
Tssr155149 19 10937751 to 10937759 8 + TSS region transcription start site region 155149
Cpgi10628 19 10940101 to 10941339 1238 CpG island CpG island 10628
Ccdc86 19 10941481 to 10949266 7785 - protein coding gene coiled-coil domain containing 86
Tssr155150 19 10945262 to 10945268 6 + TSS region transcription start site region 155150
Tssr158258 19 10948297 to 10948342 45 - TSS region transcription start site region 158258
Tssr155151 19 10948407 to 10948427 20 + TSS region transcription start site region 155151
Cpgi10629 19 10948447 to 10949468 1021 CpG island CpG island 10629
Tssr158259 19 10948502 to 10948544 42 - TSS region transcription start site region 158259
Tssr158260 19 10948550 to 10948567 17 - TSS region transcription start site region 158260
Tssr158261 19 10948568 to 10948574 6 - TSS region transcription start site region 158261
Tssr158262 19 10949238 to 10949277 39 - TSS region transcription start site region 158262
Tssr5445 19 10952348 to 10952391 43 + TSS region transcription start site region 5445
Ms4ac 19 10962293 to 11640851 678558 complex/cluster/region membrane-spanning 4-domains, subfamily A cluster
Ms4a10 19 10962293 to 10974670 12377 - protein coding gene membrane-spanning 4-domains, subfamily A, member 10
Tssr158263 19 10968721 to 10968738 17 - TSS region transcription start site region 158263
Tssr158264 19 10968760 to 10968772 12 - TSS region transcription start site region 158264
Tssr158265 19 10974649 to 10974662 13 - TSS region transcription start site region 158265
Tssr158266 19 10974664 to 10974710 46 - TSS region transcription start site region 158266
Ms4a15 19 10978307 to 10993250 14943 - protein coding gene membrane-spanning 4-domains, subfamily A, member 15
Tssr158267 19 10993176 to 10993186 10 - TSS region transcription start site region 158267
Ms4a18 19 10997024 to 11018026 21002 - protein coding gene membrane-spanning 4-domains, subfamily A, member 18
Tssr158268 19 11017919 to 11017926 7 - TSS region transcription start site region 158268
Tssr158269 19 11017933 to 11017980 47 - TSS region transcription start site region 158269
Tssr158270 19 11018026 to 11018040 14 - TSS region transcription start site region 158270
Tssr158271 19 11018051 to 11018060 9 - TSS region transcription start site region 158271
Gm28347 19 11035415 to 11035832 417 - lincRNA gene predicted gene 28347
Tssr158272 19 11037661 to 11037667 6 - TSS region transcription start site region 158272
Cpgi10630 19 11044899 to 11045577 678 CpG island CpG island 10630
Tssr155152 19 11047612 to 11047619 7 + TSS region transcription start site region 155152
AW112010 19 11047617 to 11050566 2949 - lincRNA gene expressed sequence AW112010
Tssr158273 19 11047902 to 11047915 13 - TSS region transcription start site region 158273
Tssr158274 19 11047942 to 11047980 38 - TSS region transcription start site region 158274
Tssr155153 19 11047966 to 11047992 26 + TSS region transcription start site region 155153
Tssr158275 19 11048031 to 11048042 11 - TSS region transcription start site region 158275
Tssr158276 19 11048303 to 11048379 76 - TSS region transcription start site region 158276
Tssr158277 19 11049411 to 11049423 12 - TSS region transcription start site region 158277
Tssr158278 19 11049448 to 11049464 16 - TSS region transcription start site region 158278
Tssr158279 19 11049929 to 11049932 3 - TSS region transcription start site region 158279
Tssr158280 19 11050413 to 11050433 20 - TSS region transcription start site region 158280
Tssr158281 19 11050436 to 11050441 5 - TSS region transcription start site region 158281
Tssr158282 19 11050500 to 11050531 31 - TSS region transcription start site region 158282
Tssr158283 19 11052014 to 11052016 2 - TSS region transcription start site region 158283
Tssr158284 19 11055633 to 11055669 36 - TSS region transcription start site region 158284
Tssr158285 19 11055771 to 11055786 15 - TSS region transcription start site region 158285
Tssr158286 19 11055818 to 11055829 11 - TSS region transcription start site region 158286
Tssr158287 19 11055850 to 11055881 31 - TSS region transcription start site region 158287
Ms4a8a 19 11067471 to 11081102 13631 - protein coding gene membrane-spanning 4-domains, subfamily A, member 8A
Tssr158288 19 11081034 to 11081045 11 - TSS region transcription start site region 158288
Tssr158289 19 11081066 to 11081077 11 - TSS region transcription start site region 158289
Tssr158290 19 11081088 to 11081111 23 - TSS region transcription start site region 158290
Gm336 19 11090598 to 11092077 1479 - pseudogene predicted pseudogene 336
Cpgi10631 19 11092195 to 11092520 325 CpG island CpG island 10631