Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10811727-11961741

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441 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd6 19 10789341 to 10830058 40717 - protein coding gene CD6 antigen
Tssr158241 19 10829580 to 10829591 11 - TSS region transcription start site region 158241
Tssr158242 19 10829897 to 10829902 5 - TSS region transcription start site region 158242
Tssr158243 19 10829905 to 10829910 5 - TSS region transcription start site region 158243
Tssr158244 19 10829921 to 10830042 121 - TSS region transcription start site region 158244
Tssr158245 19 10830045 to 10830063 18 - TSS region transcription start site region 158245
Tssr158246 19 10832173 to 10832188 15 - TSS region transcription start site region 158246
Tssr155111 19 10839715 to 10839737 22 + TSS region transcription start site region 155111
Tssr155112 19 10839855 to 10839867 12 + TSS region transcription start site region 155112
Tssr155113 19 10839878 to 10839898 20 + TSS region transcription start site region 155113
Gm10802 19 10840162 to 10841761 1599 protein coding gene predicted gene 10802
Tssr158247 19 10841706 to 10841720 14 - TSS region transcription start site region 158247
Tssr155114 19 10842338 to 10842369 31 + TSS region transcription start site region 155114
Tssr155115 19 10842508 to 10842524 16 + TSS region transcription start site region 155115
Tssr155116 19 10842531 to 10842564 33 + TSS region transcription start site region 155116
Slc15a3 19 10842544 to 10857915 15371 + protein coding gene solute carrier family 15, member 3
Tssr155117 19 10842578 to 10842589 11 + TSS region transcription start site region 155117
Tssr155118 19 10842763 to 10842768 5 + TSS region transcription start site region 155118
Tssr155119 19 10842792 to 10842807 15 + TSS region transcription start site region 155119
Tssr155120 19 10842817 to 10842828 11 + TSS region transcription start site region 155120
Tssr155121 19 10842843 to 10842855 12 + TSS region transcription start site region 155121
Cpgi10622 19 10842849 to 10843322 473 CpG island CpG island 10622
Tssr158248 19 10842863 to 10842945 82 - TSS region transcription start site region 158248
Tssr155122 19 10842971 to 10842993 22 + TSS region transcription start site region 155122
Tssr155123 19 10843015 to 10843020 5 + TSS region transcription start site region 155123
Tssr155124 19 10843260 to 10843269 9 + TSS region transcription start site region 155124
Tssr155125 19 10843314 to 10843323 9 + TSS region transcription start site region 155125
Tssr158249 19 10845500 to 10845525 25 - TSS region transcription start site region 158249
Tssr155126 19 10845736 to 10845761 25 + TSS region transcription start site region 155126
Tssr155127 19 10848515 to 10848528 13 + TSS region transcription start site region 155127
Tssr155128 19 10848627 to 10848638 11 + TSS region transcription start site region 155128
Tssr155129 19 10849146 to 10849168 22 + TSS region transcription start site region 155129
Tssr155130 19 10850256 to 10850274 18 + TSS region transcription start site region 155130
Tssr155131 19 10850289 to 10850310 21 + TSS region transcription start site region 155131
Tssr155132 19 10850312 to 10850330 18 + TSS region transcription start site region 155132
Tssr155133 19 10850359 to 10850370 11 + TSS region transcription start site region 155133
Tssr155134 19 10850371 to 10850382 11 + TSS region transcription start site region 155134
Tssr155135 19 10850385 to 10850411 26 + TSS region transcription start site region 155135
Tssr155136 19 10850423 to 10850439 16 + TSS region transcription start site region 155136
Tssr155137 19 10850453 to 10850464 11 + TSS region transcription start site region 155137
Tssr155138 19 10850479 to 10850488 9 + TSS region transcription start site region 155138
Tssr155139 19 10850496 to 10850507 11 + TSS region transcription start site region 155139
Tmem132a 19 10857829 to 10869935 12106 - protein coding gene transmembrane protein 132A
Cpgi10623 19 10858966 to 10859189 223 CpG island CpG island 10623
Tssr155140 19 10859779 to 10859795 16 + TSS region transcription start site region 155140
Tssr155141 19 10859822 to 10859833 11 + TSS region transcription start site region 155141
Tssr155142 19 10859887 to 10859898 11 + TSS region transcription start site region 155142
Cpgi10624 19 10860182 to 10860442 260 CpG island CpG island 10624
Cpgi10625 19 10869261 to 10870001 740 CpG island CpG island 10625
Tssr158250 19 10869745 to 10869752 7 - TSS region transcription start site region 158250
Tssr158251 19 10869757 to 10869798 41 - TSS region transcription start site region 158251
Tmem109 19 10870657 to 10881743 11086 - protein coding gene transmembrane protein 109
Tssr158252 19 10871624 to 10871639 15 - TSS region transcription start site region 158252
Tssr158253 19 10871926 to 10871938 12 - TSS region transcription start site region 158253
Tssr158254 19 10880389 to 10880411 22 - TSS region transcription start site region 158254
Cpgi10626 19 10881197 to 10882163 966 CpG island CpG island 10626
Tssr158255 19 10881677 to 10881717 40 - TSS region transcription start site region 158255
Tssr158256 19 10881723 to 10881766 43 - TSS region transcription start site region 158256
Cpgi10627 19 10895116 to 10895839 723 CpG island CpG island 10627
Tssr155143 19 10895225 to 10895272 47 + TSS region transcription start site region 155143
Prpf19 19 10895231 to 10909559 14328 + protein coding gene pre-mRNA processing factor 19
Tssr155144 19 10895274 to 10895313 39 + TSS region transcription start site region 155144
Tssr155145 19 10895372 to 10895383 11 + TSS region transcription start site region 155145
Tssr155146 19 10895391 to 10895402 11 + TSS region transcription start site region 155146
Tssr155147 19 10895420 to 10895425 5 + TSS region transcription start site region 155147
Zp1 19 10914296 to 10920601 6305 - protein coding gene zona pellucida glycoprotein 1
Tssr158257 19 10920629 to 10920635 6 - TSS region transcription start site region 158257
Tssr155148 19 10937154 to 10937178 24 + TSS region transcription start site region 155148
Ptgdr2 19 10937160 to 10942511 5351 + protein coding gene prostaglandin D2 receptor 2
Tssr155149 19 10937751 to 10937759 8 + TSS region transcription start site region 155149
Cpgi10628 19 10940101 to 10941339 1238 CpG island CpG island 10628
Ccdc86 19 10941481 to 10949266 7785 - protein coding gene coiled-coil domain containing 86
Tssr155150 19 10945262 to 10945268 6 + TSS region transcription start site region 155150
Tssr158258 19 10948297 to 10948342 45 - TSS region transcription start site region 158258
Tssr155151 19 10948407 to 10948427 20 + TSS region transcription start site region 155151
Cpgi10629 19 10948447 to 10949468 1021 CpG island CpG island 10629
Tssr158259 19 10948502 to 10948544 42 - TSS region transcription start site region 158259
Tssr158260 19 10948550 to 10948567 17 - TSS region transcription start site region 158260
Tssr158261 19 10948568 to 10948574 6 - TSS region transcription start site region 158261
Tssr158262 19 10949238 to 10949277 39 - TSS region transcription start site region 158262
Tssr5445 19 10952348 to 10952391 43 + TSS region transcription start site region 5445
Ms4a10 19 10962293 to 10974670 12377 - protein coding gene membrane-spanning 4-domains, subfamily A, member 10
Ms4ac 19 10962293 to 11640851 678558 complex/cluster/region membrane-spanning 4-domains, subfamily A cluster
Tssr158263 19 10968721 to 10968738 17 - TSS region transcription start site region 158263
Tssr158264 19 10968760 to 10968772 12 - TSS region transcription start site region 158264
Tssr158265 19 10974649 to 10974662 13 - TSS region transcription start site region 158265
Tssr158266 19 10974664 to 10974710 46 - TSS region transcription start site region 158266
Ms4a15 19 10978307 to 10993250 14943 - protein coding gene membrane-spanning 4-domains, subfamily A, member 15
Tssr158267 19 10993176 to 10993186 10 - TSS region transcription start site region 158267
Ms4a18 19 10997024 to 11018026 21002 - protein coding gene membrane-spanning 4-domains, subfamily A, member 18
Tssr158268 19 11017919 to 11017926 7 - TSS region transcription start site region 158268
Tssr158269 19 11017933 to 11017980 47 - TSS region transcription start site region 158269
Tssr158270 19 11018026 to 11018040 14 - TSS region transcription start site region 158270
Tssr158271 19 11018051 to 11018060 9 - TSS region transcription start site region 158271
Gm28347 19 11035415 to 11035832 417 - lincRNA gene predicted gene 28347
Tssr158272 19 11037661 to 11037667 6 - TSS region transcription start site region 158272
Cpgi10630 19 11044899 to 11045577 678 CpG island CpG island 10630
Tssr155152 19 11047612 to 11047619 7 + TSS region transcription start site region 155152
AW112010 19 11047617 to 11050566 2949 - lincRNA gene expressed sequence AW112010
Tssr158273 19 11047902 to 11047915 13 - TSS region transcription start site region 158273
Tssr158274 19 11047942 to 11047980 38 - TSS region transcription start site region 158274
Tssr155153 19 11047966 to 11047992 26 + TSS region transcription start site region 155153
Tssr158275 19 11048031 to 11048042 11 - TSS region transcription start site region 158275
Tssr158276 19 11048303 to 11048379 76 - TSS region transcription start site region 158276
Tssr158277 19 11049411 to 11049423 12 - TSS region transcription start site region 158277
Tssr158278 19 11049448 to 11049464 16 - TSS region transcription start site region 158278
Tssr158279 19 11049929 to 11049932 3 - TSS region transcription start site region 158279
Tssr158280 19 11050413 to 11050433 20 - TSS region transcription start site region 158280
Tssr158281 19 11050436 to 11050441 5 - TSS region transcription start site region 158281
Tssr158282 19 11050500 to 11050531 31 - TSS region transcription start site region 158282
Tssr158283 19 11052014 to 11052016 2 - TSS region transcription start site region 158283
Tssr158284 19 11055633 to 11055669 36 - TSS region transcription start site region 158284
Tssr158285 19 11055771 to 11055786 15 - TSS region transcription start site region 158285
Tssr158286 19 11055818 to 11055829 11 - TSS region transcription start site region 158286
Tssr158287 19 11055850 to 11055881 31 - TSS region transcription start site region 158287
Ms4a8a 19 11067471 to 11081102 13631 - protein coding gene membrane-spanning 4-domains, subfamily A, member 8A
Tssr158288 19 11081034 to 11081045 11 - TSS region transcription start site region 158288
Tssr158289 19 11081066 to 11081077 11 - TSS region transcription start site region 158289
Tssr158290 19 11081088 to 11081111 23 - TSS region transcription start site region 158290
Gm336 19 11090598 to 11092077 1479 - pseudogene predicted pseudogene 336
Cpgi10631 19 11092195 to 11092520 325 CpG island CpG island 10631
1700017D01Rik 19 11096816 to 11130876 34060 - protein coding gene RIKEN cDNA 1700017D01 gene
Tssr158291 19 11096904 to 11096906 2 - TSS region transcription start site region 158291
Cpgi10632 19 11121003 to 11121515 512 CpG island CpG island 10632
Tssr155154 19 11121351 to 11121370 19 + TSS region transcription start site region 155154
Tssr155155 19 11121383 to 11121411 28 + TSS region transcription start site region 155155
Gm6501 19 11121510 to 11122425 915 + pseudogene predicted gene 6501
Tssr158292 19 11130778 to 11130784 6 - TSS region transcription start site region 158292
Tssr158293 19 11130805 to 11130814 9 - TSS region transcription start site region 158293
Tssr158294 19 11130819 to 11130859 40 - TSS region transcription start site region 158294
1700025F22Rik 19 11139664 to 11165320 25656 - protein coding gene RIKEN cDNA 1700025F22 gene
Tssr158295 19 11165298 to 11165336 38 - TSS region transcription start site region 158295
Tssr158296 19 11165341 to 11165350 9 - TSS region transcription start site region 158296
Tssr158297 19 11165352 to 11165356 4 - TSS region transcription start site region 158297
Tssr158298 19 11165563 to 11165570 7 - TSS region transcription start site region 158298
Tssr5446 19 11165597 to 11165604 7 - TSS region transcription start site region 5446
Ms4a13 19 11169418 to 11196737 27319 - protein coding gene membrane-spanning 4-domains, subfamily A, member 13
Tssr158299 19 11196684 to 11196692 8 - TSS region transcription start site region 158299
Tssr158300 19 11196700 to 11196742 42 - TSS region transcription start site region 158300
4930526L06Rik 19 11196817 to 11299884 103067 + antisense lncRNA gene RIKEN cDNA 4930526L06 gene
Ms4a12 19 11215010 to 11230540 15530 - protein coding gene membrane-spanning 4-domains, subfamily A, member 12
Tssr158301 19 11232433 to 11232459 26 - TSS region transcription start site region 158301
Ms4a1 19 11250603 to 11266151 15548 - protein coding gene membrane-spanning 4-domains, subfamily A, member 1
Tssr158302 19 11266105 to 11266114 9 - TSS region transcription start site region 158302
Tssr158303 19 11266122 to 11266161 39 - TSS region transcription start site region 158303
Tssr158304 19 11266168 to 11266197 29 - TSS region transcription start site region 158304
Ms4a5 19 11273866 to 11283895 10029 - protein coding gene membrane-spanning 4-domains, subfamily A, member 5
Tssr158305 19 11277944 to 11277953 9 - TSS region transcription start site region 158305
Tssr158306 19 11278689 to 11278699 10 - TSS region transcription start site region 158306
Tssr5447 19 11279404 to 11279417 13 - TSS region transcription start site region 5447
Tssr158307 19 11279432 to 11279444 12 - TSS region transcription start site region 158307
Tssr158308 19 11279630 to 11279637 7 - TSS region transcription start site region 158308
Tssr158309 19 11279646 to 11279659 13 - TSS region transcription start site region 158309
Tssr158310 19 11279691 to 11279696 5 - TSS region transcription start site region 158310
Tssr158311 19 11283866 to 11283879 13 - TSS region transcription start site region 158311
Tssr158312 19 11283881 to 11283884 3 - TSS region transcription start site region 158312
Tssr155156 19 11292408 to 11292421 13 + TSS region transcription start site region 155156
Tssr155157 19 11292423 to 11292437 14 + TSS region transcription start site region 155157
Ms4a14 19 11301249 to 11314454 13205 - protein coding gene membrane-spanning 4-domains, subfamily A, member 14
Tssr158313 19 11302203 to 11302215 12 - TSS region transcription start site region 158313
Tssr158314 19 11304325 to 11304336 11 - TSS region transcription start site region 158314
Tssr158315 19 11304363 to 11304374 11 - TSS region transcription start site region 158315
Tssr158316 19 11304476 to 11304481 5 - TSS region transcription start site region 158316
Tssr158317 19 11314423 to 11314434 11 - TSS region transcription start site region 158317
Tssr158318 19 11314443 to 11314461 18 - TSS region transcription start site region 158318
Ms4a7 19 11321039 to 11336146 15107 - protein coding gene membrane-spanning 4-domains, subfamily A, member 7
Tssr155158 19 11321406 to 11321418 12 + TSS region transcription start site region 155158
Tssr158319 19 11321574 to 11321585 11 - TSS region transcription start site region 158319
Tssr158320 19 11324088 to 11324100 12 - TSS region transcription start site region 158320
Tssr158321 19 11324152 to 11324174 22 - TSS region transcription start site region 158321
Tssr158322 19 11324225 to 11324241 16 - TSS region transcription start site region 158322
Tssr158323 19 11324524 to 11324545 21 - TSS region transcription start site region 158323
Tssr158324 19 11324555 to 11324638 83 - TSS region transcription start site region 158324
Tssr158325 19 11326795 to 11326816 21 - TSS region transcription start site region 158325
Tssr158326 19 11326837 to 11326873 36 - TSS region transcription start site region 158326
Tssr158327 19 11326913 to 11326928 15 - TSS region transcription start site region 158327
Tssr158328 19 11327104 to 11327118 14 - TSS region transcription start site region 158328
Tssr158329 19 11327128 to 11327139 11 - TSS region transcription start site region 158329
Tssr158330 19 11327153 to 11327165 12 - TSS region transcription start site region 158330
Tssr158331 19 11327237 to 11327248 11 - TSS region transcription start site region 158331
Tssr158332 19 11327958 to 11327982 24 - TSS region transcription start site region 158332
Tssr158333 19 11327987 to 11328013 26 - TSS region transcription start site region 158333
Tssr158334 19 11330372 to 11330387 15 - TSS region transcription start site region 158334
Tssr155159 19 11333204 to 11333240 36 + TSS region transcription start site region 155159
Tssr158335 19 11334374 to 11334399 25 - TSS region transcription start site region 158335
Tssr158336 19 11336052 to 11336069 17 - TSS region transcription start site region 158336
Tssr158337 19 11336074 to 11336087 13 - TSS region transcription start site region 158337
Tssr158338 19 11336107 to 11336124 17 - TSS region transcription start site region 158338
Tssr155160 19 11356090 to 11356103 13 + TSS region transcription start site region 155160
Tssr155161 19 11362273 to 11362288 15 + TSS region transcription start site region 155161
Gm28935 19 11362278 to 11363890 1612 + lincRNA gene predicted gene 28935
Tssr158339 19 11372242 to 11372261 19 - TSS region transcription start site region 158339
Tssr158340 19 11372349 to 11372373 24 - TSS region transcription start site region 158340
Tssr158341 19 11372376 to 11372390 14 - TSS region transcription start site region 158341
Tssr155162 19 11372531 to 11372540 9 + TSS region transcription start site region 155162
Tssr155163 19 11372541 to 11372556 15 + TSS region transcription start site region 155163
Tssr155164 19 11372563 to 11372587 24 + TSS region transcription start site region 155164
Tssr155165 19 11372657 to 11372672 15 + TSS region transcription start site region 155165
Tssr155166 19 11372695 to 11372713 18 + TSS region transcription start site region 155166
Tssr158342 19 11372925 to 11372949 24 - TSS region transcription start site region 158342