Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10700359-11000370

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129 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps37c 19 10688815 to 10714419 25604 + protein coding gene vacuolar protein sorting 37C
D19Mit126 19 10706389 to 10706508 119 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 126
Tssr155095 19 10712924 to 10712944 20 + TSS region transcription start site region 155095
Tssr155096 19 10712955 to 10712968 13 + TSS region transcription start site region 155096
Tssr155097 19 10713029 to 10713043 14 + TSS region transcription start site region 155097
Cd5 19 10718143 to 10738974 20831 - protein coding gene CD5 antigen
Tssr158227 19 10719122 to 10719126 4 - TSS region transcription start site region 158227
Tssr158228 19 10719418 to 10719430 12 - TSS region transcription start site region 158228
Cpgi10619 19 10723213 to 10723386 173 CpG island CpG island 10619
Tssr158229 19 10725301 to 10725311 10 - TSS region transcription start site region 158229
Tssr158230 19 10726293 to 10726297 4 - TSS region transcription start site region 158230
Tssr155098 19 10732116 to 10732131 15 + TSS region transcription start site region 155098
Tssr155099 19 10732314 to 10732325 11 + TSS region transcription start site region 155099
Tssr155100 19 10735262 to 10735280 18 + TSS region transcription start site region 155100
Tssr158231 19 10738844 to 10738866 22 - TSS region transcription start site region 158231
Tssr158232 19 10738869 to 10738935 66 - TSS region transcription start site region 158232
Tssr158233 19 10738939 to 10738956 17 - TSS region transcription start site region 158233
Tssr158234 19 10738971 to 10738982 11 - TSS region transcription start site region 158234
Tssr155101 19 10739117 to 10739126 9 + TSS region transcription start site region 155101
D19Ihc1 19 10739480 to 10739774 294 DNA segment DNA segment, Chr 19, Immologia Hospital Clinic 1
Tssr158235 19 10740723 to 10740746 23 - TSS region transcription start site region 158235
Tssr155102 19 10740935 to 10740949 14 + TSS region transcription start site region 155102
A430093F15Rik 19 10740947 to 10786043 45096 + lncRNA gene RIKEN cDNA A430093F15 gene
Tssr155103 19 10741891 to 10741897 6 + TSS region transcription start site region 155103
Tssr155104 19 10747983 to 10747999 16 + TSS region transcription start site region 155104
D19Mit22 19 10751974 to 10752075 101 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 22
Tssr155105 19 10759798 to 10759840 42 + TSS region transcription start site region 155105
Tssr158236 19 10760065 to 10760080 15 - TSS region transcription start site region 158236
Tssr158237 19 10772070 to 10772096 26 - TSS region transcription start site region 158237
Tssr155106 19 10781846 to 10781880 34 + TSS region transcription start site region 155106
Tssr155107 19 10783523 to 10783533 10 + TSS region transcription start site region 155107
Tssr158238 19 10783975 to 10783992 17 - TSS region transcription start site region 158238
Tssr155108 19 10784223 to 10784232 9 + TSS region transcription start site region 155108
Tssr158239 19 10784256 to 10784272 16 - TSS region transcription start site region 158239
Tssr155109 19 10784412 to 10784450 38 + TSS region transcription start site region 155109
Tssr155110 19 10784581 to 10784599 18 + TSS region transcription start site region 155110
Cd6 19 10789341 to 10830058 40717 - protein coding gene CD6 antigen
Tssr158240 19 10794656 to 10794678 22 - TSS region transcription start site region 158240
Cpgi10620 19 10798458 to 10798618 160 CpG island CpG island 10620
Cpgi10621 19 10799291 to 10799513 222 CpG island CpG island 10621
Tssr158241 19 10829580 to 10829591 11 - TSS region transcription start site region 158241
Tssr158242 19 10829897 to 10829902 5 - TSS region transcription start site region 158242
Tssr158243 19 10829905 to 10829910 5 - TSS region transcription start site region 158243
Tssr158244 19 10829921 to 10830042 121 - TSS region transcription start site region 158244
Tssr158245 19 10830045 to 10830063 18 - TSS region transcription start site region 158245
Tssr158246 19 10832173 to 10832188 15 - TSS region transcription start site region 158246
Tssr155111 19 10839715 to 10839737 22 + TSS region transcription start site region 155111
Tssr155112 19 10839855 to 10839867 12 + TSS region transcription start site region 155112
Tssr155113 19 10839878 to 10839898 20 + TSS region transcription start site region 155113
Gm10802 19 10840162 to 10841761 1599 protein coding gene predicted gene 10802
Tssr158247 19 10841706 to 10841720 14 - TSS region transcription start site region 158247
Tssr155114 19 10842338 to 10842369 31 + TSS region transcription start site region 155114
Tssr155115 19 10842508 to 10842524 16 + TSS region transcription start site region 155115
Tssr155116 19 10842531 to 10842564 33 + TSS region transcription start site region 155116
Slc15a3 19 10842544 to 10857915 15371 + protein coding gene solute carrier family 15, member 3
Tssr155117 19 10842578 to 10842589 11 + TSS region transcription start site region 155117
Tssr155118 19 10842763 to 10842768 5 + TSS region transcription start site region 155118
Tssr155119 19 10842792 to 10842807 15 + TSS region transcription start site region 155119
Tssr155120 19 10842817 to 10842828 11 + TSS region transcription start site region 155120
Tssr155121 19 10842843 to 10842855 12 + TSS region transcription start site region 155121
Cpgi10622 19 10842849 to 10843322 473 CpG island CpG island 10622
Tssr158248 19 10842863 to 10842945 82 - TSS region transcription start site region 158248
Tssr155122 19 10842971 to 10842993 22 + TSS region transcription start site region 155122
Tssr155123 19 10843015 to 10843020 5 + TSS region transcription start site region 155123
Tssr155124 19 10843260 to 10843269 9 + TSS region transcription start site region 155124
Tssr155125 19 10843314 to 10843323 9 + TSS region transcription start site region 155125
Tssr158249 19 10845500 to 10845525 25 - TSS region transcription start site region 158249
Tssr155126 19 10845736 to 10845761 25 + TSS region transcription start site region 155126
Tssr155127 19 10848515 to 10848528 13 + TSS region transcription start site region 155127
Tssr155128 19 10848627 to 10848638 11 + TSS region transcription start site region 155128
Tssr155129 19 10849146 to 10849168 22 + TSS region transcription start site region 155129
Tssr155130 19 10850256 to 10850274 18 + TSS region transcription start site region 155130
Tssr155131 19 10850289 to 10850310 21 + TSS region transcription start site region 155131
Tssr155132 19 10850312 to 10850330 18 + TSS region transcription start site region 155132
Tssr155133 19 10850359 to 10850370 11 + TSS region transcription start site region 155133
Tssr155134 19 10850371 to 10850382 11 + TSS region transcription start site region 155134
Tssr155135 19 10850385 to 10850411 26 + TSS region transcription start site region 155135
Tssr155136 19 10850423 to 10850439 16 + TSS region transcription start site region 155136
Tssr155137 19 10850453 to 10850464 11 + TSS region transcription start site region 155137
Tssr155138 19 10850479 to 10850488 9 + TSS region transcription start site region 155138
Tssr155139 19 10850496 to 10850507 11 + TSS region transcription start site region 155139
Tmem132a 19 10857829 to 10869935 12106 - protein coding gene transmembrane protein 132A
Cpgi10623 19 10858966 to 10859189 223 CpG island CpG island 10623
Tssr155140 19 10859779 to 10859795 16 + TSS region transcription start site region 155140
Tssr155141 19 10859822 to 10859833 11 + TSS region transcription start site region 155141
Tssr155142 19 10859887 to 10859898 11 + TSS region transcription start site region 155142
Cpgi10624 19 10860182 to 10860442 260 CpG island CpG island 10624
Cpgi10625 19 10869261 to 10870001 740 CpG island CpG island 10625
Tssr158250 19 10869745 to 10869752 7 - TSS region transcription start site region 158250
Tssr158251 19 10869757 to 10869798 41 - TSS region transcription start site region 158251
Tmem109 19 10870657 to 10881743 11086 - protein coding gene transmembrane protein 109
Tssr158252 19 10871624 to 10871639 15 - TSS region transcription start site region 158252
Tssr158253 19 10871926 to 10871938 12 - TSS region transcription start site region 158253
Tssr158254 19 10880389 to 10880411 22 - TSS region transcription start site region 158254
Cpgi10626 19 10881197 to 10882163 966 CpG island CpG island 10626
Tssr158255 19 10881677 to 10881717 40 - TSS region transcription start site region 158255
Tssr158256 19 10881723 to 10881766 43 - TSS region transcription start site region 158256
Cpgi10627 19 10895116 to 10895839 723 CpG island CpG island 10627
Tssr155143 19 10895225 to 10895272 47 + TSS region transcription start site region 155143
Prpf19 19 10895231 to 10909559 14328 + protein coding gene pre-mRNA processing factor 19
Tssr155144 19 10895274 to 10895313 39 + TSS region transcription start site region 155144
Tssr155145 19 10895372 to 10895383 11 + TSS region transcription start site region 155145
Tssr155146 19 10895391 to 10895402 11 + TSS region transcription start site region 155146
Tssr155147 19 10895420 to 10895425 5 + TSS region transcription start site region 155147
Zp1 19 10914296 to 10920601 6305 - protein coding gene zona pellucida glycoprotein 1
Tssr158257 19 10920629 to 10920635 6 - TSS region transcription start site region 158257
Tssr155148 19 10937154 to 10937178 24 + TSS region transcription start site region 155148
Ptgdr2 19 10937160 to 10942511 5351 + protein coding gene prostaglandin D2 receptor 2
Tssr155149 19 10937751 to 10937759 8 + TSS region transcription start site region 155149
Cpgi10628 19 10940101 to 10941339 1238 CpG island CpG island 10628
Ccdc86 19 10941481 to 10949266 7785 - protein coding gene coiled-coil domain containing 86
Tssr155150 19 10945262 to 10945268 6 + TSS region transcription start site region 155150
Tssr158258 19 10948297 to 10948342 45 - TSS region transcription start site region 158258
Tssr155151 19 10948407 to 10948427 20 + TSS region transcription start site region 155151
Cpgi10629 19 10948447 to 10949468 1021 CpG island CpG island 10629
Tssr158259 19 10948502 to 10948544 42 - TSS region transcription start site region 158259
Tssr158260 19 10948550 to 10948567 17 - TSS region transcription start site region 158260
Tssr158261 19 10948568 to 10948574 6 - TSS region transcription start site region 158261
Tssr158262 19 10949238 to 10949277 39 - TSS region transcription start site region 158262
Tssr5445 19 10952348 to 10952391 43 + TSS region transcription start site region 5445
Ms4a10 19 10962293 to 10974670 12377 - protein coding gene membrane-spanning 4-domains, subfamily A, member 10
Ms4ac 19 10962293 to 11640851 678558 complex/cluster/region membrane-spanning 4-domains, subfamily A cluster
Tssr158263 19 10968721 to 10968738 17 - TSS region transcription start site region 158263
Tssr158264 19 10968760 to 10968772 12 - TSS region transcription start site region 158264
Tssr158265 19 10974649 to 10974662 13 - TSS region transcription start site region 158265
Tssr158266 19 10974664 to 10974710 46 - TSS region transcription start site region 158266
Ms4a15 19 10978307 to 10993250 14943 - protein coding gene membrane-spanning 4-domains, subfamily A, member 15
Tssr158267 19 10993176 to 10993186 10 - TSS region transcription start site region 158267
Ms4a18 19 10997024 to 11018026 21002 - protein coding gene membrane-spanning 4-domains, subfamily A, member 18