Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10475478-10672362

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp1r32 19 10474257 to 10482897 8640 - protein coding gene protein phosphatase 1, regulatory subunit 32
Tssr158184 19 10482669 to 10482708 39 - TSS region transcription start site region 158184
Tssr158185 19 10482874 to 10482938 64 - TSS region transcription start site region 158185
Sdhaf2 19 10500513 to 10525209 24696 - protein coding gene succinate dehydrogenase complex assembly factor 2
Cpgi10611 19 10524679 to 10525920 1241 CpG island CpG island 10611
Tssr158186 19 10525104 to 10525150 46 - TSS region transcription start site region 158186
Tssr158187 19 10525151 to 10525181 30 - TSS region transcription start site region 158187
Tssr158188 19 10525182 to 10525197 15 - TSS region transcription start site region 158188
Tssr158189 19 10525201 to 10525214 13 - TSS region transcription start site region 158189
Cpsf7 19 10525244 to 10547735 22491 + protein coding gene cleavage and polyadenylation specific factor 7
Tssr155052 19 10525250 to 10525305 55 + TSS region transcription start site region 155052
Tssr155053 19 10525315 to 10525326 11 + TSS region transcription start site region 155053
Tssr155054 19 10525584 to 10525605 21 + TSS region transcription start site region 155054
Tssr158190 19 10525701 to 10525732 31 - TSS region transcription start site region 158190
Tssr155055 19 10535435 to 10535444 9 + TSS region transcription start site region 155055
Tmem216 19 10539403 to 10556303 16900 - protein coding gene transmembrane protein 216
Tssr158191 19 10554790 to 10554834 44 - TSS region transcription start site region 158191
Tssr155056 19 10554964 to 10554973 9 + TSS region transcription start site region 155056
Cpgi10612 19 10555594 to 10556205 611 CpG island CpG island 10612
Tssr158192 19 10555724 to 10555761 37 - TSS region transcription start site region 158192
Tssr5444 19 10555762 to 10555782 20 - TSS region transcription start site region 5444
Tssr158193 19 10555808 to 10555814 6 - TSS region transcription start site region 158193
Tssr158194 19 10556198 to 10556275 77 - TSS region transcription start site region 158194
Tmem138 19 10570478 to 10577362 6884 - protein coding gene transmembrane protein 138
Cpgi10613 19 10576811 to 10577782 971 CpG island CpG island 10613
Tssr158195 19 10577053 to 10577095 42 - TSS region transcription start site region 158195
Tssr158196 19 10577098 to 10577120 22 - TSS region transcription start site region 158196
Tssr155057 19 10577147 to 10577175 28 + TSS region transcription start site region 155057
Tssr155058 19 10577180 to 10577196 16 + TSS region transcription start site region 155058
Tssr158197 19 10577367 to 10577407 40 - TSS region transcription start site region 158197
Tssr155059 19 10577439 to 10577461 22 + TSS region transcription start site region 155059
Cyb561a3 19 10577454 to 10588548 11094 + protein coding gene cytochrome b561 family, member A3
Tssr155060 19 10577464 to 10577475 11 + TSS region transcription start site region 155060
Tssr155061 19 10577481 to 10577492 11 + TSS region transcription start site region 155061
Tssr155062 19 10582184 to 10582207 23 + TSS region transcription start site region 155062
Tssr155063 19 10582221 to 10582252 31 + TSS region transcription start site region 155063
Tssr155064 19 10582270 to 10582280 10 + TSS region transcription start site region 155064
Tssr155065 19 10582281 to 10582313 32 + TSS region transcription start site region 155065
Tssr155066 19 10582315 to 10582325 10 + TSS region transcription start site region 155066
Tssr155067 19 10589109 to 10589119 10 + TSS region transcription start site region 155067
Tkfc 19 10592200 to 10604258 12058 - protein coding gene triokinase, FMN cyclase
Tssr158198 19 10592523 to 10592552 29 - TSS region transcription start site region 158198
Tssr158199 19 10593175 to 10593186 11 - TSS region transcription start site region 158199
Cpgi10614 19 10602852 to 10603050 198 CpG island CpG island 10614
Tssr158200 19 10604304 to 10604315 11 - TSS region transcription start site region 158200
Tssr158201 19 10604316 to 10604337 21 - TSS region transcription start site region 158201
Tssr158202 19 10604353 to 10604367 14 - TSS region transcription start site region 158202
Tssr158203 19 10604394 to 10604397 3 - TSS region transcription start site region 158203
Cpgi10615 19 10605232 to 10606053 821 CpG island CpG island 10615
Tssr158204 19 10605365 to 10605405 40 - TSS region transcription start site region 158204
Tssr158205 19 10605410 to 10605466 56 - TSS region transcription start site region 158205
Tssr158206 19 10605467 to 10605470 3 - TSS region transcription start site region 158206
Tssr155068 19 10605539 to 10605554 15 + TSS region transcription start site region 155068
Tssr155069 19 10605556 to 10605614 58 + TSS region transcription start site region 155069
Ddb1 19 10605625 to 10629813 24188 + protein coding gene damage specific DNA binding protein 1
Tssr155070 19 10605627 to 10605644 17 + TSS region transcription start site region 155070
Tssr155071 19 10605684 to 10605695 11 + TSS region transcription start site region 155071
Tssr158207 19 10605868 to 10605915 47 - TSS region transcription start site region 158207
Tssr155072 19 10605919 to 10605948 29 + TSS region transcription start site region 155072
Tssr155073 19 10606273 to 10606288 15 + TSS region transcription start site region 155073
Tssr155074 19 10607792 to 10607813 21 + TSS region transcription start site region 155074
Tssr155075 19 10608247 to 10608270 23 + TSS region transcription start site region 155075
Tssr155076 19 10621868 to 10621896 28 + TSS region transcription start site region 155076
Tssr155077 19 10622337 to 10622386 49 + TSS region transcription start site region 155077
Tssr155078 19 10629306 to 10629326 20 + TSS region transcription start site region 155078
Cpgi10616 19 10634172 to 10634693 521 CpG island CpG island 10616
Tssr155079 19 10634223 to 10634245 22 + TSS region transcription start site region 155079
Vwce 19 10634233 to 10665210 30977 + protein coding gene von Willebrand factor C and EGF domains
Tssr155080 19 10634300 to 10634312 12 + TSS region transcription start site region 155080
Tssr155081 19 10634313 to 10634324 11 + TSS region transcription start site region 155081
Cpgi10617 19 10634977 to 10635359 382 CpG island CpG island 10617
4930524O05Rik 19 10645694 to 10648053 2359 - lncRNA gene RIKEN cDNA 4930524O05 gene
Tssr155082 19 10648226 to 10648233 7 + TSS region transcription start site region 155082
Tssr158208 19 10667610 to 10667617 7 - TSS region transcription start site region 158208
Pga5 19 10668957 to 10678071 9114 - protein coding gene pepsinogen 5, group I
Tssr158209 19 10668997 to 10669006 9 - TSS region transcription start site region 158209
Tssr155083 19 10669351 to 10669380 29 + TSS region transcription start site region 155083
Tssr158210 19 10669450 to 10669459 9 - TSS region transcription start site region 158210
Tssr158211 19 10669586 to 10669612 26 - TSS region transcription start site region 158211
Tssr158212 19 10671858 to 10671871 13 - TSS region transcription start site region 158212