Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10400512-10625209

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syt7 19 10389090 to 10453181 64091 + protein coding gene synaptotagmin VII
Tssr155048 19 10403981 to 10403996 15 + TSS region transcription start site region 155048
Cpgi10607 19 10422128 to 10422527 399 CpG island CpG island 10607
Cpgi10608 19 10422528 to 10423119 591 CpG island CpG island 10608
Tssr155049 19 10426023 to 10426034 11 + TSS region transcription start site region 155049
Tssr155050 19 10426144 to 10426157 13 + TSS region transcription start site region 155050
Cpgi10609 19 10426152 to 10426544 392 CpG island CpG island 10609
Tssr155051 19 10435190 to 10435206 16 + TSS region transcription start site region 155051
Lrrc10b 19 10455371 to 10457447 2076 - protein coding gene leucine rich repeat containing 10B
Cpgi10610 19 10456225 to 10458079 1854 CpG island CpG island 10610
Tssr158179 19 10457545 to 10457557 12 - TSS region transcription start site region 158179
Tssr158180 19 10457565 to 10457584 19 - TSS region transcription start site region 158180
Tssr158181 19 10461434 to 10461437 3 - TSS region transcription start site region 158181
Tssr158182 19 10462277 to 10462287 10 - TSS region transcription start site region 158182
Tssr158183 19 10462307 to 10462312 5 - TSS region transcription start site region 158183
Ppp1r32 19 10474257 to 10482897 8640 - protein coding gene protein phosphatase 1, regulatory subunit 32
Tssr158184 19 10482669 to 10482708 39 - TSS region transcription start site region 158184
Tssr158185 19 10482874 to 10482938 64 - TSS region transcription start site region 158185
Sdhaf2 19 10500513 to 10525209 24696 - protein coding gene succinate dehydrogenase complex assembly factor 2
Cpgi10611 19 10524679 to 10525920 1241 CpG island CpG island 10611
Tssr158186 19 10525104 to 10525150 46 - TSS region transcription start site region 158186
Tssr158187 19 10525151 to 10525181 30 - TSS region transcription start site region 158187
Tssr158188 19 10525182 to 10525197 15 - TSS region transcription start site region 158188
Tssr158189 19 10525201 to 10525214 13 - TSS region transcription start site region 158189
Cpsf7 19 10525244 to 10547735 22491 + protein coding gene cleavage and polyadenylation specific factor 7
Tssr155052 19 10525250 to 10525305 55 + TSS region transcription start site region 155052
Tssr155053 19 10525315 to 10525326 11 + TSS region transcription start site region 155053
Tssr155054 19 10525584 to 10525605 21 + TSS region transcription start site region 155054
Tssr158190 19 10525701 to 10525732 31 - TSS region transcription start site region 158190
Tssr155055 19 10535435 to 10535444 9 + TSS region transcription start site region 155055
Tmem216 19 10539403 to 10556303 16900 - protein coding gene transmembrane protein 216
Tssr158191 19 10554790 to 10554834 44 - TSS region transcription start site region 158191
Tssr155056 19 10554964 to 10554973 9 + TSS region transcription start site region 155056
Cpgi10612 19 10555594 to 10556205 611 CpG island CpG island 10612
Tssr158192 19 10555724 to 10555761 37 - TSS region transcription start site region 158192
Tssr5444 19 10555762 to 10555782 20 - TSS region transcription start site region 5444
Tssr158193 19 10555808 to 10555814 6 - TSS region transcription start site region 158193
Tssr158194 19 10556198 to 10556275 77 - TSS region transcription start site region 158194
Tmem138 19 10570478 to 10577362 6884 - protein coding gene transmembrane protein 138
Cpgi10613 19 10576811 to 10577782 971 CpG island CpG island 10613
Tssr158195 19 10577053 to 10577095 42 - TSS region transcription start site region 158195
Tssr158196 19 10577098 to 10577120 22 - TSS region transcription start site region 158196
Tssr155057 19 10577147 to 10577175 28 + TSS region transcription start site region 155057
Tssr155058 19 10577180 to 10577196 16 + TSS region transcription start site region 155058
Tssr158197 19 10577367 to 10577407 40 - TSS region transcription start site region 158197
Tssr155059 19 10577439 to 10577461 22 + TSS region transcription start site region 155059
Cyb561a3 19 10577454 to 10588548 11094 + protein coding gene cytochrome b561 family, member A3
Tssr155060 19 10577464 to 10577475 11 + TSS region transcription start site region 155060
Tssr155061 19 10577481 to 10577492 11 + TSS region transcription start site region 155061
Tssr155062 19 10582184 to 10582207 23 + TSS region transcription start site region 155062
Tssr155063 19 10582221 to 10582252 31 + TSS region transcription start site region 155063
Tssr155064 19 10582270 to 10582280 10 + TSS region transcription start site region 155064
Tssr155065 19 10582281 to 10582313 32 + TSS region transcription start site region 155065
Tssr155066 19 10582315 to 10582325 10 + TSS region transcription start site region 155066
Tssr155067 19 10589109 to 10589119 10 + TSS region transcription start site region 155067
Tkfc 19 10592200 to 10604258 12058 - protein coding gene triokinase, FMN cyclase
Tssr158198 19 10592523 to 10592552 29 - TSS region transcription start site region 158198
Tssr158199 19 10593175 to 10593186 11 - TSS region transcription start site region 158199
Cpgi10614 19 10602852 to 10603050 198 CpG island CpG island 10614
Tssr158200 19 10604304 to 10604315 11 - TSS region transcription start site region 158200
Tssr158201 19 10604316 to 10604337 21 - TSS region transcription start site region 158201
Tssr158202 19 10604353 to 10604367 14 - TSS region transcription start site region 158202
Tssr158203 19 10604394 to 10604397 3 - TSS region transcription start site region 158203
Cpgi10615 19 10605232 to 10606053 821 CpG island CpG island 10615
Tssr158204 19 10605365 to 10605405 40 - TSS region transcription start site region 158204
Tssr158205 19 10605410 to 10605466 56 - TSS region transcription start site region 158205
Tssr158206 19 10605467 to 10605470 3 - TSS region transcription start site region 158206
Tssr155068 19 10605539 to 10605554 15 + TSS region transcription start site region 155068
Tssr155069 19 10605556 to 10605614 58 + TSS region transcription start site region 155069
Ddb1 19 10605625 to 10629813 24188 + protein coding gene damage specific DNA binding protein 1
Tssr155070 19 10605627 to 10605644 17 + TSS region transcription start site region 155070
Tssr155071 19 10605684 to 10605695 11 + TSS region transcription start site region 155071
Tssr158207 19 10605868 to 10605915 47 - TSS region transcription start site region 158207
Tssr155072 19 10605919 to 10605948 29 + TSS region transcription start site region 155072
Tssr155073 19 10606273 to 10606288 15 + TSS region transcription start site region 155073
Tssr155074 19 10607792 to 10607813 21 + TSS region transcription start site region 155074
Tssr155075 19 10608247 to 10608270 23 + TSS region transcription start site region 155075
Tssr155076 19 10621868 to 10621896 28 + TSS region transcription start site region 155076
Tssr155077 19 10622337 to 10622386 49 + TSS region transcription start site region 155077