Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10379109-10799119

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171 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10606 19 10388450 to 10390097 1647 CpG island CpG island 10606
Tssr155041 19 10388999 to 10389063 64 + TSS region transcription start site region 155041
Tssr155042 19 10389068 to 10389084 16 + TSS region transcription start site region 155042
Tssr5443 19 10389086 to 10389100 14 + TSS region transcription start site region 5443
Syt7 19 10389090 to 10453181 64091 + protein coding gene synaptotagmin VII
Gm26859 19 10389130 to 10391735 2605 - lincRNA gene predicted gene, 26859
Tssr155043 19 10389205 to 10389214 9 + TSS region transcription start site region 155043
Tssr155044 19 10389218 to 10389233 15 + TSS region transcription start site region 155044
Tssr155045 19 10389236 to 10389259 23 + TSS region transcription start site region 155045
Tssr155046 19 10389270 to 10389291 21 + TSS region transcription start site region 155046
Tssr155047 19 10389386 to 10389441 55 + TSS region transcription start site region 155047
Tssr155048 19 10403981 to 10403996 15 + TSS region transcription start site region 155048
Cpgi10607 19 10422128 to 10422527 399 CpG island CpG island 10607
Cpgi10608 19 10422528 to 10423119 591 CpG island CpG island 10608
Tssr155049 19 10426023 to 10426034 11 + TSS region transcription start site region 155049
Tssr155050 19 10426144 to 10426157 13 + TSS region transcription start site region 155050
Cpgi10609 19 10426152 to 10426544 392 CpG island CpG island 10609
Tssr155051 19 10435190 to 10435206 16 + TSS region transcription start site region 155051
Lrrc10b 19 10455371 to 10457447 2076 - protein coding gene leucine rich repeat containing 10B
Cpgi10610 19 10456225 to 10458079 1854 CpG island CpG island 10610
Tssr158179 19 10457545 to 10457557 12 - TSS region transcription start site region 158179
Tssr158180 19 10457565 to 10457584 19 - TSS region transcription start site region 158180
Tssr158181 19 10461434 to 10461437 3 - TSS region transcription start site region 158181
Tssr158182 19 10462277 to 10462287 10 - TSS region transcription start site region 158182
Tssr158183 19 10462307 to 10462312 5 - TSS region transcription start site region 158183
Ppp1r32 19 10474257 to 10482897 8640 - protein coding gene protein phosphatase 1, regulatory subunit 32
Tssr158184 19 10482669 to 10482708 39 - TSS region transcription start site region 158184
Tssr158185 19 10482874 to 10482938 64 - TSS region transcription start site region 158185
Sdhaf2 19 10500513 to 10525209 24696 - protein coding gene succinate dehydrogenase complex assembly factor 2
Cpgi10611 19 10524679 to 10525920 1241 CpG island CpG island 10611
Tssr158186 19 10525104 to 10525150 46 - TSS region transcription start site region 158186
Tssr158187 19 10525151 to 10525181 30 - TSS region transcription start site region 158187
Tssr158188 19 10525182 to 10525197 15 - TSS region transcription start site region 158188
Tssr158189 19 10525201 to 10525214 13 - TSS region transcription start site region 158189
Cpsf7 19 10525244 to 10547735 22491 + protein coding gene cleavage and polyadenylation specific factor 7
Tssr155052 19 10525250 to 10525305 55 + TSS region transcription start site region 155052
Tssr155053 19 10525315 to 10525326 11 + TSS region transcription start site region 155053
Tssr155054 19 10525584 to 10525605 21 + TSS region transcription start site region 155054
Tssr158190 19 10525701 to 10525732 31 - TSS region transcription start site region 158190
Tssr155055 19 10535435 to 10535444 9 + TSS region transcription start site region 155055
Tmem216 19 10539403 to 10556303 16900 - protein coding gene transmembrane protein 216
Tssr158191 19 10554790 to 10554834 44 - TSS region transcription start site region 158191
Tssr155056 19 10554964 to 10554973 9 + TSS region transcription start site region 155056
Cpgi10612 19 10555594 to 10556205 611 CpG island CpG island 10612
Tssr158192 19 10555724 to 10555761 37 - TSS region transcription start site region 158192
Tssr5444 19 10555762 to 10555782 20 - TSS region transcription start site region 5444
Tssr158193 19 10555808 to 10555814 6 - TSS region transcription start site region 158193
Tssr158194 19 10556198 to 10556275 77 - TSS region transcription start site region 158194
Tmem138 19 10570478 to 10577362 6884 - protein coding gene transmembrane protein 138
Cpgi10613 19 10576811 to 10577782 971 CpG island CpG island 10613
Tssr158195 19 10577053 to 10577095 42 - TSS region transcription start site region 158195
Tssr158196 19 10577098 to 10577120 22 - TSS region transcription start site region 158196
Tssr155057 19 10577147 to 10577175 28 + TSS region transcription start site region 155057
Tssr155058 19 10577180 to 10577196 16 + TSS region transcription start site region 155058
Tssr158197 19 10577367 to 10577407 40 - TSS region transcription start site region 158197
Tssr155059 19 10577439 to 10577461 22 + TSS region transcription start site region 155059
Cyb561a3 19 10577454 to 10588548 11094 + protein coding gene cytochrome b561 family, member A3
Tssr155060 19 10577464 to 10577475 11 + TSS region transcription start site region 155060
Tssr155061 19 10577481 to 10577492 11 + TSS region transcription start site region 155061
Tssr155062 19 10582184 to 10582207 23 + TSS region transcription start site region 155062
Tssr155063 19 10582221 to 10582252 31 + TSS region transcription start site region 155063
Tssr155064 19 10582270 to 10582280 10 + TSS region transcription start site region 155064
Tssr155065 19 10582281 to 10582313 32 + TSS region transcription start site region 155065
Tssr155066 19 10582315 to 10582325 10 + TSS region transcription start site region 155066
Tssr155067 19 10589109 to 10589119 10 + TSS region transcription start site region 155067
Tkfc 19 10592200 to 10604258 12058 - protein coding gene triokinase, FMN cyclase
Tssr158198 19 10592523 to 10592552 29 - TSS region transcription start site region 158198
Tssr158199 19 10593175 to 10593186 11 - TSS region transcription start site region 158199
Cpgi10614 19 10602852 to 10603050 198 CpG island CpG island 10614
Tssr158200 19 10604304 to 10604315 11 - TSS region transcription start site region 158200
Tssr158201 19 10604316 to 10604337 21 - TSS region transcription start site region 158201
Tssr158202 19 10604353 to 10604367 14 - TSS region transcription start site region 158202
Tssr158203 19 10604394 to 10604397 3 - TSS region transcription start site region 158203
Cpgi10615 19 10605232 to 10606053 821 CpG island CpG island 10615
Tssr158204 19 10605365 to 10605405 40 - TSS region transcription start site region 158204
Tssr158205 19 10605410 to 10605466 56 - TSS region transcription start site region 158205
Tssr158206 19 10605467 to 10605470 3 - TSS region transcription start site region 158206
Tssr155068 19 10605539 to 10605554 15 + TSS region transcription start site region 155068
Tssr155069 19 10605556 to 10605614 58 + TSS region transcription start site region 155069
Ddb1 19 10605625 to 10629813 24188 + protein coding gene damage specific DNA binding protein 1
Tssr155070 19 10605627 to 10605644 17 + TSS region transcription start site region 155070
Tssr155071 19 10605684 to 10605695 11 + TSS region transcription start site region 155071
Tssr158207 19 10605868 to 10605915 47 - TSS region transcription start site region 158207
Tssr155072 19 10605919 to 10605948 29 + TSS region transcription start site region 155072
Tssr155073 19 10606273 to 10606288 15 + TSS region transcription start site region 155073
Tssr155074 19 10607792 to 10607813 21 + TSS region transcription start site region 155074
Tssr155075 19 10608247 to 10608270 23 + TSS region transcription start site region 155075
Tssr155076 19 10621868 to 10621896 28 + TSS region transcription start site region 155076
Tssr155077 19 10622337 to 10622386 49 + TSS region transcription start site region 155077
Tssr155078 19 10629306 to 10629326 20 + TSS region transcription start site region 155078
Cpgi10616 19 10634172 to 10634693 521 CpG island CpG island 10616
Tssr155079 19 10634223 to 10634245 22 + TSS region transcription start site region 155079
Vwce 19 10634233 to 10665210 30977 + protein coding gene von Willebrand factor C and EGF domains
Tssr155080 19 10634300 to 10634312 12 + TSS region transcription start site region 155080
Tssr155081 19 10634313 to 10634324 11 + TSS region transcription start site region 155081
Cpgi10617 19 10634977 to 10635359 382 CpG island CpG island 10617
4930524O05Rik 19 10645694 to 10648053 2359 - lncRNA gene RIKEN cDNA 4930524O05 gene
Tssr155082 19 10648226 to 10648233 7 + TSS region transcription start site region 155082
Tssr158208 19 10667610 to 10667617 7 - TSS region transcription start site region 158208
Pga5 19 10668957 to 10678071 9114 - protein coding gene pepsinogen 5, group I
Tssr158209 19 10668997 to 10669006 9 - TSS region transcription start site region 158209
Tssr155083 19 10669351 to 10669380 29 + TSS region transcription start site region 155083
Tssr158210 19 10669450 to 10669459 9 - TSS region transcription start site region 158210
Tssr158211 19 10669586 to 10669612 26 - TSS region transcription start site region 158211
Tssr158212 19 10671858 to 10671871 13 - TSS region transcription start site region 158212
Tssr158213 19 10673667 to 10673681 14 - TSS region transcription start site region 158213
Tssr158214 19 10673733 to 10673745 12 - TSS region transcription start site region 158214
Tssr158215 19 10674901 to 10674930 29 - TSS region transcription start site region 158215
Tssr155084 19 10675040 to 10675051 11 + TSS region transcription start site region 155084
Tssr158216 19 10675073 to 10675080 7 - TSS region transcription start site region 158216
Tssr155085 19 10675084 to 10675092 8 + TSS region transcription start site region 155085
Tssr158217 19 10675101 to 10675108 7 - TSS region transcription start site region 158217
Tssr158218 19 10675119 to 10675158 39 - TSS region transcription start site region 158218
Tssr158219 19 10676430 to 10676438 8 - TSS region transcription start site region 158219
Tssr158220 19 10676663 to 10676670 7 - TSS region transcription start site region 158220
Tssr158221 19 10676680 to 10676727 47 - TSS region transcription start site region 158221
Tssr158222 19 10676777 to 10676832 55 - TSS region transcription start site region 158222
Tssr158223 19 10677246 to 10677250 4 - TSS region transcription start site region 158223
Tssr158224 19 10678001 to 10678020 19 - TSS region transcription start site region 158224
Tssr158225 19 10678027 to 10678038 11 - TSS region transcription start site region 158225
2210404E10Rik 19 10684793 to 10685558 765 + lincRNA gene RIKEN cDNA 2210404E10 gene
Tssr158226 19 10685175 to 10685209 34 - TSS region transcription start site region 158226
Cpgi10618 19 10688394 to 10689515 1121 CpG island CpG island 10618
Tssr155086 19 10688724 to 10688740 16 + TSS region transcription start site region 155086
Tssr155087 19 10688744 to 10688818 74 + TSS region transcription start site region 155087
Vps37c 19 10688815 to 10714419 25604 + protein coding gene vacuolar protein sorting 37C
Tssr155088 19 10688918 to 10688959 41 + TSS region transcription start site region 155088
Tssr155089 19 10689228 to 10689243 15 + TSS region transcription start site region 155089
Tssr155090 19 10689256 to 10689279 23 + TSS region transcription start site region 155090
Tssr155091 19 10698530 to 10698565 35 + TSS region transcription start site region 155091
Tssr155092 19 10699336 to 10699349 13 + TSS region transcription start site region 155092
Tssr155093 19 10699365 to 10699376 11 + TSS region transcription start site region 155093
Tssr155094 19 10699379 to 10699394 15 + TSS region transcription start site region 155094
D19Mit126 19 10706389 to 10706508 119 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 126
Tssr155095 19 10712924 to 10712944 20 + TSS region transcription start site region 155095
Tssr155096 19 10712955 to 10712968 13 + TSS region transcription start site region 155096
Tssr155097 19 10713029 to 10713043 14 + TSS region transcription start site region 155097
Cd5 19 10718143 to 10738974 20831 - protein coding gene CD5 antigen
Tssr158227 19 10719122 to 10719126 4 - TSS region transcription start site region 158227
Tssr158228 19 10719418 to 10719430 12 - TSS region transcription start site region 158228
Cpgi10619 19 10723213 to 10723386 173 CpG island CpG island 10619
Tssr158229 19 10725301 to 10725311 10 - TSS region transcription start site region 158229
Tssr158230 19 10726293 to 10726297 4 - TSS region transcription start site region 158230
Tssr155098 19 10732116 to 10732131 15 + TSS region transcription start site region 155098
Tssr155099 19 10732314 to 10732325 11 + TSS region transcription start site region 155099
Tssr155100 19 10735262 to 10735280 18 + TSS region transcription start site region 155100
Tssr158231 19 10738844 to 10738866 22 - TSS region transcription start site region 158231
Tssr158232 19 10738869 to 10738935 66 - TSS region transcription start site region 158232
Tssr158233 19 10738939 to 10738956 17 - TSS region transcription start site region 158233
Tssr158234 19 10738971 to 10738982 11 - TSS region transcription start site region 158234
Tssr155101 19 10739117 to 10739126 9 + TSS region transcription start site region 155101
D19Ihc1 19 10739480 to 10739774 294 DNA segment DNA segment, Chr 19, Immologia Hospital Clinic 1
Tssr158235 19 10740723 to 10740746 23 - TSS region transcription start site region 158235
Tssr155102 19 10740935 to 10740949 14 + TSS region transcription start site region 155102
A430093F15Rik 19 10740947 to 10786043 45096 + lncRNA gene RIKEN cDNA A430093F15 gene
Tssr155103 19 10741891 to 10741897 6 + TSS region transcription start site region 155103
Tssr155104 19 10747983 to 10747999 16 + TSS region transcription start site region 155104
D19Mit22 19 10751974 to 10752075 101 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 22
Tssr155105 19 10759798 to 10759840 42 + TSS region transcription start site region 155105
Tssr158236 19 10760065 to 10760080 15 - TSS region transcription start site region 158236
Tssr158237 19 10772070 to 10772096 26 - TSS region transcription start site region 158237
Tssr155106 19 10781846 to 10781880 34 + TSS region transcription start site region 155106
Tssr155107 19 10783523 to 10783533 10 + TSS region transcription start site region 155107
Tssr158238 19 10783975 to 10783992 17 - TSS region transcription start site region 158238
Tssr155108 19 10784223 to 10784232 9 + TSS region transcription start site region 155108
Tssr158239 19 10784256 to 10784272 16 - TSS region transcription start site region 158239
Tssr155109 19 10784412 to 10784450 38 + TSS region transcription start site region 155109
Tssr155110 19 10784581 to 10784599 18 + TSS region transcription start site region 155110
Cd6 19 10789341 to 10830058 40717 - protein coding gene CD6 antigen
Tssr158240 19 10794656 to 10794678 22 - TSS region transcription start site region 158240
Cpgi10620 19 10798458 to 10798618 160 CpG island CpG island 10620