Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10080689-10400751

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fads2 19 10064164 to 10101503 37339 - protein coding gene fatty acid desaturase 2
D19Mit42 19 10083005 to 10083182 177 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 42
Tssr158154 19 10088964 to 10088999 35 - TSS region transcription start site region 158154
Tssr158155 19 10091797 to 10091822 25 - TSS region transcription start site region 158155
Tssr158156 19 10092195 to 10092204 9 - TSS region transcription start site region 158156
Tssr158157 19 10092205 to 10092217 12 - TSS region transcription start site region 158157
Cpgi10599 19 10100658 to 10102241 1583 CpG island CpG island 10599
Tssr5442 19 10101256 to 10101269 13 - TSS region transcription start site region 5442
Tssr158158 19 10101501 to 10101532 31 - TSS region transcription start site region 158158
Tssr158159 19 10101552 to 10101559 7 - TSS region transcription start site region 158159
Tssr158160 19 10101727 to 10101750 23 - TSS region transcription start site region 158160
Tssr158161 19 10101809 to 10101820 11 - TSS region transcription start site region 158161
Tssr158162 19 10101832 to 10101839 7 - TSS region transcription start site region 158162
Tssr158163 19 10121969 to 10121974 5 - TSS region transcription start site region 158163
Tssr155023 19 10177397 to 10177403 6 + TSS region transcription start site region 155023
Cpgi10600 19 10182204 to 10183945 1741 CpG island CpG island 10600
Tssr155024 19 10182868 to 10182879 11 + TSS region transcription start site region 155024
Tssr155025 19 10182885 to 10182896 11 + TSS region transcription start site region 155025
Fads1 19 10182888 to 10196870 13982 + protein coding gene fatty acid desaturase 1
Tssr155026 19 10182906 to 10182917 11 + TSS region transcription start site region 155026
Tssr155027 19 10182921 to 10182969 48 + TSS region transcription start site region 155027
Tssr155028 19 10182994 to 10183005 11 + TSS region transcription start site region 155028
Tssr155029 19 10183007 to 10183036 29 + TSS region transcription start site region 155029
Tssr155030 19 10183037 to 10183048 11 + TSS region transcription start site region 155030
Tssr155031 19 10183147 to 10183156 9 + TSS region transcription start site region 155031
Tssr158164 19 10183456 to 10183469 13 - TSS region transcription start site region 158164
Tssr155032 19 10183522 to 10183546 24 + TSS region transcription start site region 155032
Tssr155033 19 10186147 to 10186162 15 + TSS region transcription start site region 155033
Tssr155034 19 10186824 to 10186835 11 + TSS region transcription start site region 155034
Mir6993 19 10191375 to 10191439 64 + miRNA gene microRNA 6993
Tssr155035 19 10193757 to 10193771 14 + TSS region transcription start site region 155035
Tssr155036 19 10195234 to 10195257 23 + TSS region transcription start site region 155036
Gm10143 19 10198368 to 10202384 4016 + unclassified non-coding RNA gene predicted gene 10143
Fen1 19 10199132 to 10204169 5037 - protein coding gene flap structure specific endonuclease 1
Cpgi10601 19 10203594 to 10204473 879 CpG island CpG island 10601
Tssr158165 19 10203856 to 10203870 14 - TSS region transcription start site region 158165
Tssr158166 19 10203880 to 10203948 68 - TSS region transcription start site region 158166
Tssr155037 19 10204180 to 10204191 11 + TSS region transcription start site region 155037
Tssr155038 19 10204201 to 10204237 36 + TSS region transcription start site region 155038
Tmem258 19 10204202 to 10207824 3622 + protein coding gene transmembrane protein 258
Tssr155039 19 10204238 to 10204249 11 + TSS region transcription start site region 155039
Tssr158167 19 10204390 to 10204413 23 - TSS region transcription start site region 158167
Tssr155040 19 10206460 to 10206479 19 + TSS region transcription start site region 155040
Myrf 19 10208272 to 10240748 32476 - protein coding gene myelin regulatory factor
Tssr158168 19 10223566 to 10223572 6 - TSS region transcription start site region 158168
Cpgi10602 19 10225193 to 10225426 233 CpG island CpG island 10602
Tssr158169 19 10225247 to 10225262 15 - TSS region transcription start site region 158169
Tssr158170 19 10228771 to 10228793 22 - TSS region transcription start site region 158170
Tssr158171 19 10231040 to 10231052 12 - TSS region transcription start site region 158171
Tssr158172 19 10237959 to 10237972 13 - TSS region transcription start site region 158172
Tssr158173 19 10237973 to 10237984 11 - TSS region transcription start site region 158173
Cpgi10603 19 10240038 to 10241128 1090 CpG island CpG island 10603
Tssr158174 19 10240689 to 10240751 62 - TSS region transcription start site region 158174
Tssr158175 19 10240762 to 10240776 14 - TSS region transcription start site region 158175
D19Mit115 19 10242776 to 10242893 117 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 115
Dagla 19 10245265 to 10304877 59612 - protein coding gene diacylglycerol lipase, alpha
Tssr158176 19 10272930 to 10272933 3 - TSS region transcription start site region 158176
Cpgi10604 19 10277395 to 10277598 203 CpG island CpG island 10604
Gm30042 19 10290223 to 10296440 6217 + lncRNA gene predicted gene, 30042
Cpgi10605 19 10304272 to 10305563 1291 CpG island CpG island 10605
Tssr158177 19 10304854 to 10304865 11 - TSS region transcription start site region 158177
Tssr158178 19 10304867 to 10304954 87 - TSS region transcription start site region 158178
Gm30263 19 10362065 to 10366277 4212 - lncRNA gene predicted gene, 30263
Cpgi10606 19 10388450 to 10390097 1647 CpG island CpG island 10606
Tssr155041 19 10388999 to 10389063 64 + TSS region transcription start site region 155041
Tssr155042 19 10389068 to 10389084 16 + TSS region transcription start site region 155042
Tssr5443 19 10389086 to 10389100 14 + TSS region transcription start site region 5443
Syt7 19 10389090 to 10453181 64091 + protein coding gene synaptotagmin VII
Gm26859 19 10389130 to 10391735 2605 - lincRNA gene predicted gene, 26859
Tssr155043 19 10389205 to 10389214 9 + TSS region transcription start site region 155043
Tssr155044 19 10389218 to 10389233 15 + TSS region transcription start site region 155044
Tssr155045 19 10389236 to 10389259 23 + TSS region transcription start site region 155045
Tssr155046 19 10389270 to 10389291 21 + TSS region transcription start site region 155046
Tssr155047 19 10389386 to 10389441 55 + TSS region transcription start site region 155047