Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10001501-10201532

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr158146 19 10001561 to 10001582 21 - TSS region transcription start site region 158146
Tssr158147 19 10001585 to 10001622 37 - TSS region transcription start site region 158147
Tssr158148 19 10001625 to 10001632 7 - TSS region transcription start site region 158148
Best1 19 10001633 to 9985174 -16459 - protein coding gene bestrophin 1
Rab3il1 19 10001674 to 10038380 36706 + protein coding gene RAB3A interacting protein (rabin3)-like 1
Tssr155012 19 10001692 to 10001703 11 + TSS region transcription start site region 155012
Tssr5440 19 10001705 to 10001712 7 + TSS region transcription start site region 5440
Tssr155013 19 10001718 to 10001732 14 + TSS region transcription start site region 155013
Tssr155014 19 10015039 to 10015055 16 + TSS region transcription start site region 155014
Cpgi10597 19 10017759 to 10018616 857 CpG island CpG island 10597
Tssr155015 19 10018220 to 10018237 17 + TSS region transcription start site region 155015
Tssr155016 19 10018241 to 10018257 16 + TSS region transcription start site region 155016
Tssr155017 19 10018265 to 10018276 11 + TSS region transcription start site region 155017
Tssr155018 19 10022769 to 10022799 30 + TSS region transcription start site region 155018
Tssr155019 19 10028464 to 10028477 13 + TSS region transcription start site region 155019
Tssr155020 19 10034672 to 10034689 17 + TSS region transcription start site region 155020
Cpgi10598 19 10040911 to 10042559 1648 CpG island CpG island 10598
Fads3 19 10041548 to 10059671 18123 + protein coding gene fatty acid desaturase 3
Tssr155021 19 10041551 to 10041581 30 + TSS region transcription start site region 155021
Tssr155022 19 10041660 to 10041680 20 + TSS region transcription start site region 155022
Gm29917 19 10046264 to 10047940 1676 - lncRNA gene predicted gene, 29917
D19Mit51 19 10050002 to 10050083 81 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 51
D19Dcr74 19 10051259 to 10051354 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 74
Tssr158149 19 10060408 to 10060426 18 - TSS region transcription start site region 158149
Tssr158150 19 10064146 to 10064200 54 - TSS region transcription start site region 158150
Fads2 19 10064164 to 10101503 37339 - protein coding gene fatty acid desaturase 2
Tssr158151 19 10064776 to 10064815 39 - TSS region transcription start site region 158151
Tssr158152 19 10065690 to 10065731 41 - TSS region transcription start site region 158152
Tssr158153 19 10066589 to 10066603 14 - TSS region transcription start site region 158153
Tssr5441 19 10077446 to 10077450 4 + TSS region transcription start site region 5441
D19Mit42 19 10083005 to 10083182 177 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 42
Tssr158154 19 10088964 to 10088999 35 - TSS region transcription start site region 158154
Tssr158155 19 10091797 to 10091822 25 - TSS region transcription start site region 158155
Tssr158156 19 10092195 to 10092204 9 - TSS region transcription start site region 158156
Tssr158157 19 10092205 to 10092217 12 - TSS region transcription start site region 158157
Cpgi10599 19 10100658 to 10102241 1583 CpG island CpG island 10599
Tssr5442 19 10101256 to 10101269 13 - TSS region transcription start site region 5442
Tssr158158 19 10101501 to 10101532 31 - TSS region transcription start site region 158158
Tssr158159 19 10101552 to 10101559 7 - TSS region transcription start site region 158159
Tssr158160 19 10101727 to 10101750 23 - TSS region transcription start site region 158160
Tssr158161 19 10101809 to 10101820 11 - TSS region transcription start site region 158161
Tssr158162 19 10101832 to 10101839 7 - TSS region transcription start site region 158162
Tssr158163 19 10121969 to 10121974 5 - TSS region transcription start site region 158163
Tssr155023 19 10177397 to 10177403 6 + TSS region transcription start site region 155023
Cpgi10600 19 10182204 to 10183945 1741 CpG island CpG island 10600
Tssr155024 19 10182868 to 10182879 11 + TSS region transcription start site region 155024
Tssr155025 19 10182885 to 10182896 11 + TSS region transcription start site region 155025
Fads1 19 10182888 to 10196870 13982 + protein coding gene fatty acid desaturase 1
Tssr155026 19 10182906 to 10182917 11 + TSS region transcription start site region 155026
Tssr155027 19 10182921 to 10182969 48 + TSS region transcription start site region 155027
Tssr155028 19 10182994 to 10183005 11 + TSS region transcription start site region 155028
Tssr155029 19 10183007 to 10183036 29 + TSS region transcription start site region 155029
Tssr155030 19 10183037 to 10183048 11 + TSS region transcription start site region 155030
Tssr155031 19 10183147 to 10183156 9 + TSS region transcription start site region 155031
Tssr158164 19 10183456 to 10183469 13 - TSS region transcription start site region 158164
Tssr155032 19 10183522 to 10183546 24 + TSS region transcription start site region 155032
Tssr155033 19 10186147 to 10186162 15 + TSS region transcription start site region 155033
Tssr155034 19 10186824 to 10186835 11 + TSS region transcription start site region 155034
Mir6993 19 10191375 to 10191439 64 + miRNA gene microRNA 6993
Tssr155035 19 10193757 to 10193771 14 + TSS region transcription start site region 155035
Tssr155036 19 10195234 to 10195257 23 + TSS region transcription start site region 155036
Gm10143 19 10198368 to 10202384 4016 + unclassified non-coding RNA gene predicted gene 10143
Fen1 19 10199132 to 10204169 5037 - protein coding gene flap structure specific endonuclease 1