Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:9850149-10173615

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Colec12 18 9707648 to 9877995 170347 + protein coding gene collectin sub-family member 12
Tssr152402 18 9866767 to 9866779 12 - TSS region transcription start site region 152402
Tssr150017 18 9877165 to 9877180 15 + TSS region transcription start site region 150017
Gm2424 18 9909196 to 9910499 1303 + pseudogene predicted gene 2424
Gm5501 18 9916927 to 9917758 831 + pseudogene predicted gene 5501
Cpgi9696 18 9957731 to 9958633 902 CpG island CpG island 9696
Tssr150018 18 9957947 to 9957987 40 + TSS region transcription start site region 150018
Tssr150019 18 9958147 to 9958186 39 + TSS region transcription start site region 150019
Thoc1 18 9958180 to 9995484 37304 + protein coding gene THO complex 1
Tssr150020 18 9958187 to 9958192 5 + TSS region transcription start site region 150020
D18Ertd693e 18 9980009 to 9980214 205 DNA segment DNA segment, Chr 18, ERATO Doi 693, expressed
Tssr152403 18 10012787 to 10012792 5 - TSS region transcription start site region 152403
Tssr152404 18 10016882 to 10016886 4 - TSS region transcription start site region 152404
Cpgi9697 18 10029584 to 10030187 603 CpG island CpG island 9697
Tssr152405 18 10029983 to 10029996 13 - TSS region transcription start site region 152405
Tssr152406 18 10030017 to 10030146 129 - TSS region transcription start site region 152406
Usp14 18 10030149 to 9993615 -36534 - protein coding gene ubiquitin specific peptidase 14
D18Mit221.2 18 10033826 to 10033942 116 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 221.2
D18Mit221 18 10033914 to 10034036 122 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 221
Cpgi9698 18 10052010 to 10052595 585 CpG island CpG island 9698
Tssr152407 18 10052152 to 10052162 10 - TSS region transcription start site region 152407
Rock1 18 10064401 to 10181792 117391 - protein coding gene Rho-associated coiled-coil containing protein kinase 1
Tssr152408 18 10065838 to 10065840 2 - TSS region transcription start site region 152408
Tssr152409 18 10083179 to 10083197 18 - TSS region transcription start site region 152409
Tssr152410 18 10090881 to 10090923 42 - TSS region transcription start site region 152410
Tssr152411 18 10093943 to 10093967 24 - TSS region transcription start site region 152411
Tssr152412 18 10100946 to 10100955 9 - TSS region transcription start site region 152412
Tssr152413 18 10104455 to 10104478 23 - TSS region transcription start site region 152413
Tssr152414 18 10106443 to 10106462 19 - TSS region transcription start site region 152414
Tssr152415 18 10116841 to 10116871 30 - TSS region transcription start site region 152415
Tssr152416 18 10125602 to 10125606 4 - TSS region transcription start site region 152416
Gm2531 18 10145453 to 10145965 512 - pseudogene predicted gene 2531
Gm26244 18 10150977 to 10151140 163 - snRNA gene predicted gene, 26244
Tssr152417 18 10151140 to 10151143 3 - TSS region transcription start site region 152417
Tssr152418 18 10172446 to 10172451 5 - TSS region transcription start site region 152418