Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:88921135-90149136

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sicd1 18 80132049 to 89572790 9440741 QTL seizure-induced cell death 1
Tssr154165 18 88927447 to 88927481 34 - TSS region transcription start site region 154165
Tssr154166 18 88952787 to 88952805 18 - TSS region transcription start site region 154166
Cpgi10358 18 88971625 to 88972339 714 CpG island CpG island 10358
Rttn 18 88971790 to 89131013 159223 + protein coding gene rotatin
Tssr152266 18 88972002 to 88972040 38 + TSS region transcription start site region 152266
Mir6359 18 88972030 to 88972110 80 + miRNA gene microRNA 6359
Tssr152267 18 88994607 to 88994608 1 + TSS region transcription start site region 152267
D18Mit145 18 89169284 to 89169481 197 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 145
D18Mit130 18 89175475 to 89175594 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 130
Tssr152268 18 89176965 to 89176989 24 + TSS region transcription start site region 152268
Tssr152269 18 89197191 to 89197198 7 + TSS region transcription start site region 152269
Tssr152270 18 89197241 to 89197252 11 + TSS region transcription start site region 152270
Tssr152271 18 89197314 to 89197344 30 + TSS region transcription start site region 152271
Tssr152272 18 89197421 to 89197445 24 + TSS region transcription start site region 152272
Cd226 18 89197431 to 89270201 72770 + protein coding gene CD226 antigen
Tssr152273 18 89197453 to 89197459 6 + TSS region transcription start site region 152273
Tssr152274 18 89206100 to 89206106 6 + TSS region transcription start site region 152274
Tssr152275 18 89206558 to 89206573 15 + TSS region transcription start site region 152275
Tssr152276 18 89206602 to 89206613 11 + TSS region transcription start site region 152276
9330132A10Rik 18 89293502 to 89297229 3727 - pseudogene RIKEN cDNA 9330132A10 gene
Dok6 18 89301135 to 89769136 468001 - protein coding gene docking protein 6
D18Mit196 18 89318282 to 89318398 116 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 196
Gm16296 18 89534040 to 89534364 324 - pseudogene predicted gene 16296
Gm16297 18 89534603 to 89535061 458 + pseudogene predicted gene 16297
Gm18279 18 89536907 to 89602441 65534 - pseudogene predicted gene, 18279
D18Mit25 18 89572666 to 89572790 124 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 25
Gm22694 18 89733005 to 89733074 69 + miRNA gene predicted gene, 22694
Cpgi10359 18 89768847 to 89769965 1118 CpG island CpG island 10359
E330033J05Rik 18 89769030 to 89770197 1167 unclassified non-coding RNA gene RIKEN cDNA E330033J05 gene
Tssr154167 18 89769479 to 89769558 79 - TSS region transcription start site region 154167
Gm41800 18 89802932 to 89852645 49713 - lncRNA gene predicted gene, 41800
Gm27037 18 89943353 to 89944312 959 - pseudogene predicted gene, 27037
Gm6173 18 90017824 to 90019079 1255 - pseudogene predicted gene 6173