Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:88487002-89457040

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32489 18 88584503 to 88600046 15543 - lncRNA gene predicted gene, 32489
Tssr152264 18 88587462 to 88587479 17 + TSS region transcription start site region 152264
Gm7662 18 88658004 to 88658614 610 - pseudogene predicted gene 7662
Gm6409 18 88831729 to 88832581 852 - pseudogene predicted gene 6409
Socs6 18 88865169 to 88894350 29181 - protein coding gene suppressor of cytokine signaling 6
Tssr154159 18 88866265 to 88866268 3 - TSS region transcription start site region 154159
Tssr154160 18 88866780 to 88866807 27 - TSS region transcription start site region 154160
Tssr154161 18 88867193 to 88867213 20 - TSS region transcription start site region 154161
Cpgi10357 18 88893737 to 88894564 827 CpG island CpG island 10357
Tssr154162 18 88894203 to 88894215 12 - TSS region transcription start site region 154162
Tssr154163 18 88894292 to 88894319 27 - TSS region transcription start site region 154163
Tssr154164 18 88894323 to 88894371 48 - TSS region transcription start site region 154164
Tssr152265 18 88894457 to 88894466 9 + TSS region transcription start site region 152265
Tssr154165 18 88927447 to 88927481 34 - TSS region transcription start site region 154165
Tssr154166 18 88952787 to 88952805 18 - TSS region transcription start site region 154166
Cpgi10358 18 88971625 to 88972339 714 CpG island CpG island 10358
Rttn 18 88971790 to 89131013 159223 + protein coding gene rotatin
Tssr152266 18 88972002 to 88972040 38 + TSS region transcription start site region 152266
Mir6359 18 88972030 to 88972110 80 + miRNA gene microRNA 6359
Tssr152267 18 88994607 to 88994608 1 + TSS region transcription start site region 152267
D18Mit145 18 89169284 to 89169481 197 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 145
D18Mit130 18 89175475 to 89175594 119 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 130
Tssr152268 18 89176965 to 89176989 24 + TSS region transcription start site region 152268
Tssr152269 18 89197191 to 89197198 7 + TSS region transcription start site region 152269
Tssr152270 18 89197241 to 89197252 11 + TSS region transcription start site region 152270
Tssr152271 18 89197314 to 89197344 30 + TSS region transcription start site region 152271
Tssr152272 18 89197421 to 89197445 24 + TSS region transcription start site region 152272
Cd226 18 89197431 to 89270201 72770 + protein coding gene CD226 antigen
Tssr152273 18 89197453 to 89197459 6 + TSS region transcription start site region 152273
Tssr152274 18 89206100 to 89206106 6 + TSS region transcription start site region 152274
Tssr152275 18 89206558 to 89206573 15 + TSS region transcription start site region 152275
Tssr152276 18 89206602 to 89206613 11 + TSS region transcription start site region 152276
9330132A10Rik 18 89293502 to 89297229 3727 - pseudogene RIKEN cDNA 9330132A10 gene
Dok6 18 89301135 to 89769136 468001 - protein coding gene docking protein 6
D18Mit196 18 89318282 to 89318398 116 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 196