Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:86431286-89083143

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Neto1 18 86394952 to 86501897 106945 + protein coding gene neuropilin (NRP) and tolloid (TLL)-like 1
Tssr5396 18 86433020 to 86433032 12 + TSS region transcription start site region 5396
Tssr152252 18 86601943 to 86601960 17 + TSS region transcription start site region 152252
Tssr152253 18 86601965 to 86601976 11 + TSS region transcription start site region 152253
Tssr152254 18 86601989 to 86601998 9 + TSS region transcription start site region 152254
Cpgi10354 18 86710558 to 86710925 367 CpG island CpG island 10354
Tssr152255 18 86710882 to 86710894 12 + TSS region transcription start site region 152255
Tssr152256 18 86711059 to 86711063 4 + TSS region transcription start site region 152256
Cbln2 18 86711110 to 86718283 7173 + protein coding gene cerebellin 2 precursor protein
Cpgi10355 18 86711216 to 86711949 733 CpG island CpG island 10355
Tssr152257 18 86711638 to 86711650 12 + TSS region transcription start site region 152257
Tssr152258 18 86711708 to 86711740 32 + TSS region transcription start site region 152258
Cpgi10356 18 86712921 to 86713554 633 CpG island CpG island 10356
D18Mit41 18 86743694 to 86743840 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 41
Gm46615 18 86779751 to 86780177 426 + pseudogene predicted gene, 46615
Tssr152259 18 86914109 to 86914115 6 + TSS region transcription start site region 152259
Gm5691 18 86914648 to 86915563 915 + pseudogene predicted gene 5691
Gm5971 18 86925950 to 86926949 999 - pseudogene predicted gene 5971
Tssr152260 18 87004355 to 87004359 4 + TSS region transcription start site region 152260
D18Mit131 18 87029136 to 87029268 132 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 131
Gm5234 18 87231998 to 87233721 1723 + pseudogene predicted gene 5234
Tssr152261 18 87292933 to 87292935 2 + TSS region transcription start site region 152261
Gm5826 18 87473989 to 87474716 727 - pseudogene predicted gene 5826
Tssr152262 18 87756280 to 87756288 8 + TSS region transcription start site region 152262
Gm5096 18 87756286 to 87758143 1857 + pseudogene predicted gene 5096
Tssr152263 18 87757693 to 87757697 4 + TSS region transcription start site region 152263
Gm24987 18 87925431 to 87925564 133 - snoRNA gene predicted gene, 24987
Gm32437 18 88213318 to 88219532 6214 - lncRNA gene predicted gene, 32437
D18Mit102 18 88426664 to 88426810 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 102
D18Mit102.2 18 88426772 to 88426897 125 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 102.2
Gm32489 18 88584503 to 88600046 15543 - lncRNA gene predicted gene, 32489
Tssr152264 18 88587462 to 88587479 17 + TSS region transcription start site region 152264
Gm7662 18 88658004 to 88658614 610 - pseudogene predicted gene 7662
Gm6409 18 88831729 to 88832581 852 - pseudogene predicted gene 6409
Socs6 18 88865169 to 88894350 29181 - protein coding gene suppressor of cytokine signaling 6
Tssr154159 18 88866265 to 88866268 3 - TSS region transcription start site region 154159
Tssr154160 18 88866780 to 88866807 27 - TSS region transcription start site region 154160
Tssr154161 18 88867193 to 88867213 20 - TSS region transcription start site region 154161
Cpgi10357 18 88893737 to 88894564 827 CpG island CpG island 10357
Tssr154162 18 88894203 to 88894215 12 - TSS region transcription start site region 154162
Tssr154163 18 88894292 to 88894319 27 - TSS region transcription start site region 154163
Tssr154164 18 88894323 to 88894371 48 - TSS region transcription start site region 154164
Tssr152265 18 88894457 to 88894466 9 + TSS region transcription start site region 152265
Tssr154165 18 88927447 to 88927481 34 - TSS region transcription start site region 154165
Tssr154166 18 88952787 to 88952805 18 - TSS region transcription start site region 154166
Cpgi10358 18 88971625 to 88972339 714 CpG island CpG island 10358
Rttn 18 88971790 to 89131013 159223 + protein coding gene rotatin
Tssr152266 18 88972002 to 88972040 38 + TSS region transcription start site region 152266
Mir6359 18 88972030 to 88972110 80 + miRNA gene microRNA 6359
Tssr152267 18 88994607 to 88994608 1 + TSS region transcription start site region 152267