Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:85444952-87451897

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Szs4 18 54842801 to 85496018 30653217 QTL seizure susceptibility 4
Sicd4 18 69672205 to 85496018 15823813 QTL seizure-induced cell death 4
D18Mit144 18 85495842 to 85496018 176 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 144
Gm32291 18 85665083 to 85666808 1725 - lncRNA gene predicted gene, 32291
Tssr154153 18 85666791 to 85666824 33 - TSS region transcription start site region 154153
Tssr152241 18 85697927 to 85697935 8 + TSS region transcription start site region 152241
Tssr154154 18 85697953 to 85697976 23 - TSS region transcription start site region 154154
Cpgi10350 18 85698005 to 85698282 277 CpG island CpG island 10350
Tssr154155 18 85698030 to 85698062 32 - TSS region transcription start site region 154155
Tssr154156 18 85698107 to 85698138 31 - TSS region transcription start site region 154156
Tssr154157 18 85698180 to 85698187 7 - TSS region transcription start site region 154157
Tssr154158 18 85698213 to 85698215 2 - TSS region transcription start site region 154158
Gm7612 18 85715931 to 85717068 1137 - pseudogene predicted gene 7612
Cpgi10351 18 85716202 to 85716502 300 CpG island CpG island 10351
Gm5824 18 85847280 to 85848729 1449 - pseudogene predicted gene 5824
Tssr5395 18 86121686 to 86121689 3 + TSS region transcription start site region 5395
Gm7623 18 86242766 to 86243535 769 - pseudogene predicted gene 7623
Gm25453 18 86349586 to 86349692 106 + snRNA gene predicted gene, 25453
Cpgi10352 18 86394051 to 86394365 314 CpG island CpG island 10352
Tssr152242 18 86394772 to 86394782 10 + TSS region transcription start site region 152242
Tssr152243 18 86394793 to 86394803 10 + TSS region transcription start site region 152243
Cpgi10353 18 86394801 to 86396099 1298 CpG island CpG island 10353
Tssr152244 18 86394810 to 86394863 53 + TSS region transcription start site region 152244
Tssr152245 18 86394918 to 86394929 11 + TSS region transcription start site region 152245
Neto1 18 86394952 to 86501897 106945 + protein coding gene neuropilin (NRP) and tolloid (TLL)-like 1
Tssr152246 18 86394952 to 86394968 16 + TSS region transcription start site region 152246
Tssr152247 18 86395002 to 86395013 11 + TSS region transcription start site region 152247
Tssr152248 18 86395184 to 86395233 49 + TSS region transcription start site region 152248
Tssr152249 18 86395275 to 86395285 10 + TSS region transcription start site region 152249
Tssr152250 18 86395546 to 86395563 17 + TSS region transcription start site region 152250
Tssr152251 18 86408534 to 86408542 8 + TSS region transcription start site region 152251
Tssr5396 18 86433020 to 86433032 12 + TSS region transcription start site region 5396
Tssr152252 18 86601943 to 86601960 17 + TSS region transcription start site region 152252
Tssr152253 18 86601965 to 86601976 11 + TSS region transcription start site region 152253
Tssr152254 18 86601989 to 86601998 9 + TSS region transcription start site region 152254
Cpgi10354 18 86710558 to 86710925 367 CpG island CpG island 10354
Tssr152255 18 86710882 to 86710894 12 + TSS region transcription start site region 152255
Tssr152256 18 86711059 to 86711063 4 + TSS region transcription start site region 152256
Cbln2 18 86711110 to 86718283 7173 + protein coding gene cerebellin 2 precursor protein
Cpgi10355 18 86711216 to 86711949 733 CpG island CpG island 10355
Tssr152257 18 86711638 to 86711650 12 + TSS region transcription start site region 152257
Tssr152258 18 86711708 to 86711740 32 + TSS region transcription start site region 152258
Cpgi10356 18 86712921 to 86713554 633 CpG island CpG island 10356
D18Mit41 18 86743694 to 86743840 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 41
Gm46615 18 86779751 to 86780177 426 + pseudogene predicted gene, 46615
Tssr152259 18 86914109 to 86914115 6 + TSS region transcription start site region 152259
Gm5691 18 86914648 to 86915563 915 + pseudogene predicted gene 5691
Gm5971 18 86925950 to 86926949 999 - pseudogene predicted gene 5971
Tssr152260 18 87004355 to 87004359 4 + TSS region transcription start site region 152260
D18Mit131 18 87029136 to 87029268 132 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 131
Gm5234 18 87231998 to 87233721 1723 + pseudogene predicted gene 5234
Tssr152261 18 87292933 to 87292935 2 + TSS region transcription start site region 152261