Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:84843005-86553282

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Szs4 18 54842801 to 85496018 30653217 QTL seizure susceptibility 4
Sicd4 18 69672205 to 85496018 15823813 QTL seizure-induced cell death 4
Tssr152218 18 84848943 to 84848950 7 + TSS region transcription start site region 152218
Cpgi10348 18 84851290 to 84851845 555 CpG island CpG island 10348
Tssr152219 18 84851331 to 84851348 17 + TSS region transcription start site region 152219
Cyb5a 18 84851342 to 84879863 28521 + protein coding gene cytochrome b5 type A (microsomal)
Tssr152220 18 84851352 to 84851376 24 + TSS region transcription start site region 152220
Tssr152221 18 84851378 to 84851400 22 + TSS region transcription start site region 152221
Tssr152222 18 84851407 to 84851429 22 + TSS region transcription start site region 152222
Tssr152223 18 84851758 to 84851807 49 + TSS region transcription start site region 152223
Gm16146 18 84858636 to 84859547 911 - antisense lncRNA gene predicted gene 16146
Tssr152224 18 84859423 to 84859434 11 + TSS region transcription start site region 152224
Tssr152225 18 84871563 to 84871576 13 + TSS region transcription start site region 152225
Tssr152226 18 84871929 to 84871934 5 + TSS region transcription start site region 152226
Tssr152227 18 84877814 to 84877833 19 + TSS region transcription start site region 152227
Tssr152228 18 84879590 to 84879606 16 + TSS region transcription start site region 152228
Tssr152229 18 84932882 to 84932886 4 + TSS region transcription start site region 152229
Tssr152230 18 84934542 to 84934556 14 + TSS region transcription start site region 152230
Tssr152231 18 84934594 to 84934617 23 + TSS region transcription start site region 152231
Tssr152232 18 84934625 to 84934634 9 + TSS region transcription start site region 152232
Tssr152233 18 84934646 to 84934651 5 + TSS region transcription start site region 152233
Tssr152234 18 84934653 to 84934665 12 + TSS region transcription start site region 152234
Fbxo15 18 84934782 to 84981472 46690 + protein coding gene F-box protein 15
Tssr152235 18 84935015 to 84935031 16 + TSS region transcription start site region 152235
Tssr152236 18 84936206 to 84936210 4 + TSS region transcription start site region 152236
Timm21 18 84947294 to 84951524 4230 - protein coding gene translocase of inner mitochondrial membrane 21
Tssr154150 18 84951428 to 84951442 14 - TSS region transcription start site region 154150
Tssr154151 18 84951451 to 84951462 11 - TSS region transcription start site region 154151
Cpgi10349 18 84951470 to 84952366 896 CpG island CpG island 10349
Tssr154152 18 84951477 to 84951536 59 - TSS region transcription start site region 154152
Tssr152237 18 84952085 to 84952128 43 + TSS region transcription start site region 152237
D18Dcr11 18 85013395 to 85013490 95 DNA segment DNA Segment, Chr 18, Derry C. Roopenian 11
Tssr152238 18 85071746 to 85071765 19 + TSS region transcription start site region 152238
Tssr152239 18 85071767 to 85071774 7 + TSS region transcription start site region 152239
Tssr152240 18 85071833 to 85071859 26 + TSS region transcription start site region 152240
D18Dcr12 18 85359202 to 85359297 95 DNA segment DNA Segment, Chr 18, Derry C. Roopenian 12
D18Mit144 18 85495842 to 85496018 176 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 144
Gm32291 18 85665083 to 85666808 1725 - lncRNA gene predicted gene, 32291
Tssr154153 18 85666791 to 85666824 33 - TSS region transcription start site region 154153
Tssr152241 18 85697927 to 85697935 8 + TSS region transcription start site region 152241
Tssr154154 18 85697953 to 85697976 23 - TSS region transcription start site region 154154
Cpgi10350 18 85698005 to 85698282 277 CpG island CpG island 10350
Tssr154155 18 85698030 to 85698062 32 - TSS region transcription start site region 154155
Tssr154156 18 85698107 to 85698138 31 - TSS region transcription start site region 154156
Tssr154157 18 85698180 to 85698187 7 - TSS region transcription start site region 154157
Tssr154158 18 85698213 to 85698215 2 - TSS region transcription start site region 154158
Gm7612 18 85715931 to 85717068 1137 - pseudogene predicted gene 7612
Cpgi10351 18 85716202 to 85716502 300 CpG island CpG island 10351
Gm5824 18 85847280 to 85848729 1449 - pseudogene predicted gene 5824
Tssr5395 18 86121686 to 86121689 3 + TSS region transcription start site region 5395
Gm7623 18 86242766 to 86243535 769 - pseudogene predicted gene 7623
Gm25453 18 86349586 to 86349692 106 + snRNA gene predicted gene, 25453
Cpgi10352 18 86394051 to 86394365 314 CpG island CpG island 10352
Tssr152242 18 86394772 to 86394782 10 + TSS region transcription start site region 152242
Tssr152243 18 86394793 to 86394803 10 + TSS region transcription start site region 152243
Cpgi10353 18 86394801 to 86396099 1298 CpG island CpG island 10353
Tssr152244 18 86394810 to 86394863 53 + TSS region transcription start site region 152244
Tssr152245 18 86394918 to 86394929 11 + TSS region transcription start site region 152245
Neto1 18 86394952 to 86501897 106945 + protein coding gene neuropilin (NRP) and tolloid (TLL)-like 1
Tssr152246 18 86394952 to 86394968 16 + TSS region transcription start site region 152246
Tssr152247 18 86395002 to 86395013 11 + TSS region transcription start site region 152247
Tssr152248 18 86395184 to 86395233 49 + TSS region transcription start site region 152248
Tssr152249 18 86395275 to 86395285 10 + TSS region transcription start site region 152249
Tssr152250 18 86395546 to 86395563 17 + TSS region transcription start site region 152250
Tssr152251 18 86408534 to 86408542 8 + TSS region transcription start site region 152251
Tssr5396 18 86433020 to 86433032 12 + TSS region transcription start site region 5396